RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 FSTL3O95633 263 aa8.71□□□□□ -1.02
CLIP1-210ENST00000538120 RPL15P61313 204 aaKnown RBP8.71□□□□□ -1.02
CLIP1-210ENST00000538120 Q8N7P7 452 aa8.71□□□□□ -1.02
CLIP1-210ENST00000538120 C8orf31Q8N9H6 132 aa8.71□□□□□ -1.02
CLIP1-210ENST00000538120 ST6GALNAC6Q969X2 333 aa8.71□□□□□ -1.02
CLIP1-210ENST00000538120 MANBALQ9NQG1 85 aa8.71□□□□□ -1.02
CLIP1-210ENST00000538120 YLPM1P49750 1951 aaKnown RBP8.7□□□□□ -1.02
CLIP1-210ENST00000538120 SOX15O60248 233 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 NDUFB4O95168 129 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 TYMSP04818 313 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 C11orf71Q6IPW1 123 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 ABHD12Q8N2K0 398 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 CFHR4Q92496 578 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 VCX2Q9H322 139 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 H0YJW9 148 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 UPK2O00526 184 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 IGHV1-8P0DP01 117 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 SRP14P37108 136 aaKnown RBP8.7□□□□□ -1.02
CLIP1-210ENST00000538120 HSPE1P61604 102 aaKnown RBP8.7□□□□□ -1.02
CLIP1-210ENST00000538120 ACOT6Q3I5F7 207 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-210ENST00000538120 CST9LP1Q5W188 147 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 OR5AN1Q8NGI8 311 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 TPPP3Q9BW30 176 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 HEYLQ9NQ87 328 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-210ENST00000538120 CLEC5AQ9NY25 188 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 FKBP11Q9NYL4 201 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 TRAPPC1Q9Y5R8 145 aa8.7□□□□□ -1.02
CLIP1-210ENST00000538120 ANKHD1Q8IWZ3 2542 aaKnown RBP8.69□□□□□ -1.02
CLIP1-210ENST00000538120 TRBV20OR9-2A0A075B6H5 130 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 GRIFINA4D1Z8 144 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 LY6HO94772 140 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 REG1BP48304 166 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 RTL8BQ17RB0 113 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 NUDT10Q8NFP7 164 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 NABP2Q9BQ15 211 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 PATZ1Q9HBE1 687 aaKnown RBP8.69□□□□□ -1.02
CLIP1-210ENST00000538120 RALYQ9UKM9 306 aaKnown RBP8.69□□□□□ -1.02
CLIP1-210ENST00000538120 A0A1W2PPR1 153 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 CD1BP29016 333 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 UQCRFS1P47985 274 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 IQCJQ1A5X6 159 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 TMEM144Q7Z5S9 345 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 ZNF709Q8N972 641 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 CITED1Q99966 193 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 WDR83OSQ9Y284 106 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 OR51B2Q9Y5P1 312 aa8.69□□□□□ -1.02
CLIP1-210ENST00000538120 VENTXO95231 258 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 ZNF137PP52743 207 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 DLX1P56177 255 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 GAGE1Q13065 139 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 TDRG1Q3Y452 100 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 FAM71F2Q6NXP2 309 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 KCNIP4Q6PIL6 250 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 PRSS57Q6UWY2 283 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 OR10X1Q8NGY0 326 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 DPF1Q92782 380 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 PXMP4Q9Y6I8 212 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 TET2Q6N021 2002 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-210ENST00000538120 NBASA2RRP1 2371 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 SAA1P0DJI8 122 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-210ENST00000538120 ADMP35318 185 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 RBX1P62877 108 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 TMEM177Q53S58 311 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 OR9G1Q8NH87 305 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 SGMS2Q8NHU3 365 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 TMEM186Q96B77 213 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 C1orf159Q96HA4 380 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 IMMP2LQ96T52 175 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 TMEM133Q9H2Q1 129 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 BET1LQ9NYM9 111 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 PRNDQ9UKY0 176 aa8.68□□□□□ -1.02
CLIP1-210ENST00000538120 TEX50A0A1B0GTY4 177 aa8.67□□□□□ -1.02
CLIP1-210ENST00000538120 ERVFC1-1P60608 527 aa8.67□□□□□ -1.02
CLIP1-210ENST00000538120 LCN2P80188 198 aa8.67□□□□□ -1.02
CLIP1-210ENST00000538120 OSR1Q8TAX0 266 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-210ENST00000538120 RNASE8Q8TDE3 154 aaKnown RBP8.67□□□□□ -1.02
CLIP1-210ENST00000538120 ITLN2Q8WWU7 325 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-210ENST00000538120 MS4A10Q96PG2 267 aa8.67□□□□□ -1.02
CLIP1-210ENST00000538120 RAB1BQ9H0U4 201 aa8.67□□□□□ -1.02
CLIP1-210ENST00000538120 ZNF257Q9Y2Q1 563 aa8.67□□□□□ -1.02
CLIP1-210ENST00000538120 FAM181BA6NEQ2 426 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 GHRHP01286 108 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 APOA2P02652 100 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 FRMD6-AS1P0C7T7 363 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 GNLYP22749 145 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 RPL29P47914 159 aaKnown RBP8.66□□□□□ -1.02
CLIP1-210ENST00000538120 PRCDQ00LT1 54 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 PRB3Q04118 309 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-210ENST00000538120 C1orf43Q9BWL3 253 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 NAGKQ9UJ70 344 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 TP53TG3Q9ULZ0 132 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 COL6A6A6NMZ7 2263 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 ZNF705FA8MVS1 300 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-210ENST00000538120 M0QZK8 103 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 CA2P00918 260 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 ZNF705DP0CH99 300 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-210ENST00000538120 ZNF705BP0CI00 300 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-210ENST00000538120 MC5RP33032 325 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 C1orf194Q5T5A4 169 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 C8orf46Q8TAG6 207 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms