RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 THBDP07204 575 aa11.58□□□□□ -0.56
USP44-203ENST00000537435 TOMM20LQ6UXN7 152 aa11.58□□□□□ -0.56
USP44-203ENST00000537435 OR4A5Q8NH83 315 aa11.58□□□□□ -0.56
USP44-203ENST00000537435 NPIPB3Q92617 1050 aa11.58□□□□□ -0.56
USP44-203ENST00000537435 TMEM186Q96B77 213 aa11.58□□□□□ -0.56
USP44-203ENST00000537435 ZNF355PQ9NSJ1 428 aa11.58□□□□□ -0.56
USP44-203ENST00000537435 CBLN4Q9NTU7 201 aa11.58□□□□□ -0.56
USP44-203ENST00000537435 SERTAD4Q9NUC0 356 aa11.58□□□□□ -0.56
USP44-203ENST00000537435 MGAQ8IWI9 3026 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 PRRG2O14669 202 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 NDUFB3O43676 98 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 COX7A2P2O60397 106 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 IGLV2-23P01705 113 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 PYYP10082 97 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 WDR73Q6P4I2 378 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 NHLRC2Q8NBF2 726 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 LINC00479Q96M42 142 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 ZNF430Q9H8G1 570 aaPredicted RBP11.57□□□□□ -0.56
USP44-203ENST00000537435 SH3BGRL2Q9UJC5 107 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 MT-ND6P03923 174 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 KIAA1644Q3SXP7 199 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 LRRC10Q5BKY1 277 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 GNB4Q9HAV0 340 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 WASHC3Q9Y3C0 194 aa11.57□□□□□ -0.56
USP44-203ENST00000537435 C10orf113Q5VZT2 155 aa11.56□□□□□ -0.56
USP44-203ENST00000537435 FAM71F2Q6NXP2 309 aa11.56□□□□□ -0.56
USP44-203ENST00000537435 MRPL54Q6P161 138 aaKnown RBP11.56□□□□□ -0.56
USP44-203ENST00000537435 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
USP44-203ENST00000537435 OR1L4Q8NGR5 311 aa11.56□□□□□ -0.56
USP44-203ENST00000537435 ST6GALNAC6Q969X2 333 aa11.56□□□□□ -0.56
USP44-203ENST00000537435 PAXXQ9BUH6 204 aa11.56□□□□□ -0.56
USP44-203ENST00000537435 CTSZQ9UBR2 303 aa11.56□□□□□ -0.56
USP44-203ENST00000537435 ROS1P08922 2347 aa11.56□□□□□ -0.56
USP44-203ENST00000537435 IGKV1D-37A0A075B6S9 117 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 TCRBV4S1A1TA0A5B7 111 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 TNFRSF13BO14836 293 aaPredicted RBP11.55□□□□□ -0.56
USP44-203ENST00000537435 CDKN1AP38936 164 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 SUB1P53999 127 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP44-203ENST00000537435 TPTE2P1Q5T6R2 138 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 LINC00311Q8N616 119 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 MRPL36Q9P0J6 103 aaKnown RBP11.55□□□□□ -0.56
USP44-203ENST00000537435 CDC42EP3Q9UKI2 254 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 SMIM27A0A1W2PRY6 76 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 SLC25A17O43808 307 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 CA1P00915 261 aaPredicted RBP11.55□□□□□ -0.56
USP44-203ENST00000537435 COX19Q49B96 90 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 ASPHD1Q5U4P2 390 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 TGIF2LXQ8IUE1 241 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 ZNF596Q8TC21 504 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 SNHG12Q9BXW3 62 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 AMMECR1Q9Y4X0 333 aaPredicted RBP11.55□□□□□ -0.56
USP44-203ENST00000537435 SMG1Q96Q15 3661 aaKnown RBP11.55□□□□□ -0.56
USP44-203ENST00000537435 ARFGEF3Q5TH69 2177 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 CEP250Q9BV73 2442 aa11.55□□□□□ -0.56
USP44-203ENST00000537435 AMY1AP04745 511 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 REG1AP05451 166 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 LOXP28300 417 aaPredicted RBP11.54□□□□□ -0.56
USP44-203ENST00000537435 BPIFB3P59826 476 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 RITA1Q96K30 269 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 A0A1W2PPI3 338 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 TDGF1P3P51864 188 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 TDRG1Q3Y452 100 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 VMA21Q3ZAQ7 101 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 TEX43Q6ZNM6 134 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 ZNF329Q86UD4 541 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 C8orf31Q8N9H6 132 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 THAP8Q8NA92 274 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 FAM168AQ92567 244 aa11.54□□□□□ -0.56
USP44-203ENST00000537435 TRAV34A0A0B4J273 112 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 PLAUP00749 431 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 BRS3P32247 399 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 FAM103A1Q9BTL3 118 aaKnown RBP11.53□□□□□ -0.56
USP44-203ENST00000537435 SSBP3Q9BWW4 388 aaPredicted RBP11.53□□□□□ -0.56
USP44-203ENST00000537435 MAP1BP46821 2468 aaKnown RBP11.53□□□□□ -0.56
USP44-203ENST00000537435 IGHV3-72A0A0B4J1Y9 119 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 IZUMO1RA6ND01 250 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 PEX7O00628 323 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 ZNF137PP52743 207 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 DLX6P56179 175 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 OR10J3Q5JRS4 329 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 SIGLECL1Q8N7X8 197 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 VN1R17PQ8TDU5 208 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 RNASE6Q93091 150 aaKnown RBP11.53□□□□□ -0.56
USP44-203ENST00000537435 SSUH2Q9Y2M2 353 aa11.53□□□□□ -0.56
USP44-203ENST00000537435 BMPR1BO00238 502 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 ENSAO43768 121 aaKnown RBP11.52□□□□□ -0.56
USP44-203ENST00000537435 FSTL3O95633 263 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 HLA-DQA1P01909 254 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 GPX1P07203 203 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 SRIP30626 198 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 ASCL5Q7RTU5 278 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 FXYD5Q96DB9 178 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 ABHD17AQ96GS6 310 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 RCHY1Q96PM5 261 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 RNF114Q9Y508 228 aa11.52□□□□□ -0.56
USP44-203ENST00000537435 ZNF253O75346 499 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms