RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 A0A0D9SG52 128 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 PRSS46E5RG02 174 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 G3V3Q6 166 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 H3BP45 60 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 K7EIM0 57 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 TAAR5O14804 337 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 DFFBO76075 338 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 NDUFB8O95169 186 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 METTL15P1P0C7V9 234 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 SRSF2Q01130 221 aaKnown RBP12.62□□□□□ -0.39
VAMP1-205ENST00000535927 KIAA0141Q14154 515 aaPredicted RBP12.62□□□□□ -0.39
VAMP1-205ENST00000535927 NDUFA11Q86Y39 141 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 OR1S2Q8NGQ3 325 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 SCARB1Q8WTV0 552 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 SLC35E1Q96K37 410 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 KLK15Q9H2R5 256 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 NPVFQ9HCQ7 196 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 ZC4H2Q9NQZ6 224 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 HSPB11Q9Y547 144 aa12.62□□□□□ -0.39
VAMP1-205ENST00000535927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.61□□□□□ -0.39
VAMP1-205ENST00000535927 FABP1P07148 127 aa12.61□□□□□ -0.39
VAMP1-205ENST00000535927 AP2S1P53680 142 aaPredicted RBP12.61□□□□□ -0.39
VAMP1-205ENST00000535927 EWSR1Q01844 656 aaKnown RBP eCLIP12.61□□□□□ -0.39
VAMP1-205ENST00000535927 Q5BKY6 102 aa12.61□□□□□ -0.39
VAMP1-205ENST00000535927 SLC16A13Q7RTY0 426 aa12.61□□□□□ -0.39
VAMP1-205ENST00000535927 ZNF502Q8TBZ5 544 aa12.61□□□□□ -0.39
VAMP1-205ENST00000535927 C4orf3Q8WVX3 66 aa12.61□□□□□ -0.39
VAMP1-205ENST00000535927 BSCL2Q96G97 398 aaPredicted RBP12.61□□□□□ -0.39
VAMP1-205ENST00000535927 ZNF747Q9BV97 191 aa12.61□□□□□ -0.39
VAMP1-205ENST00000535927 CUBNO60494 3623 aa12.61□□□□□ -0.39
VAMP1-205ENST00000535927 IGSF23A1L1A6 192 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 MPDU1O75352 247 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 PRH1P02810 166 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 RPLP1P05386 114 aaKnown RBP12.6□□□□□ -0.39
VAMP1-205ENST00000535927 C4BPBP20851 252 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 RAB31Q13636 194 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 VWC2Q2TAL6 325 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 ZFP69Q49AA0 526 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 OR8G2PQ6IF36 304 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 TMEM144Q7Z5S9 345 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 MFFQ9GZY8 342 aa12.6□□□□□ -0.39
VAMP1-205ENST00000535927 CLN5O75503 358 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 CST7O76096 145 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 LGALS1P09382 135 aaKnown RBP12.59□□□□□ -0.39
VAMP1-205ENST00000535927 GAMTQ14353 236 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 ZNF266Q14584 549 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 TCTEX1D4Q5JR98 221 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 ACSM6Q6P461 480 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 C12orf54Q6X4T0 127 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 LILRB2Q8N423 598 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 CITED1Q99966 193 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 TMEM147Q9BVK8 224 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 PARD6GQ9BYG4 376 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-205ENST00000535927 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-205ENST00000535927 UQCC1Q9NVA1 299 aa12.59□□□□□ -0.39
VAMP1-205ENST00000535927 PEF1Q9UBV8 284 aaKnown RBP12.59□□□□□ -0.39
VAMP1-205ENST00000535927 GNG7O60262 68 aa12.58□□□□□ -0.4
VAMP1-205ENST00000535927 CFDP00746 253 aaPredicted RBP12.58□□□□□ -0.4
VAMP1-205ENST00000535927 HSPB1P04792 205 aaKnown RBP12.58□□□□□ -0.4
VAMP1-205ENST00000535927 CD28P10747 220 aa12.58□□□□□ -0.4
VAMP1-205ENST00000535927 ANK2Q01484 3957 aa12.58□□□□□ -0.4
VAMP1-205ENST00000535927 NHLH2Q02577 135 aa12.58□□□□□ -0.4
VAMP1-205ENST00000535927 SHISA2Q6UWI4 295 aa12.58□□□□□ -0.4
VAMP1-205ENST00000535927 C10orf99Q6UWK7 81 aa12.58□□□□□ -0.4
VAMP1-205ENST00000535927 OR5C1Q8NGR4 320 aa12.58□□□□□ -0.4
VAMP1-205ENST00000535927 TAF15Q92804 592 aaKnown RBP eCLIP12.58□□□□□ -0.4
VAMP1-205ENST00000535927 I3L521 148 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 NUPL2O15504 423 aaKnown RBP12.57□□□□□ -0.4
VAMP1-205ENST00000535927 ARPC5O15511 151 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 IFNA5P01569 189 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 CLEC3BP05452 202 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 ZP3P21754 424 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 YPEL3P61236 119 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-205ENST00000535927 SELENOTP62341 195 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 EIF5AP63241 154 aaKnown RBP12.57□□□□□ -0.4
VAMP1-205ENST00000535927 RELQ04864 619 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-205ENST00000535927 TEPPQ6URK8 271 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 KCNRGQ8N5I3 272 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 TMEM217Q8N7C4 229 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 C3orf56Q8N813 242 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 THAP8Q8NA92 274 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 OR11H4Q8NGC9 324 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 ATP5SQ99766 215 aa12.57□□□□□ -0.4
VAMP1-205ENST00000535927 CITED2Q99967 270 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-205ENST00000535927 RNF222A6NCQ9 220 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 MFSD2BA6NFX1 497 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 GGCTO75223 188 aaKnown RBP12.56□□□□□ -0.4
VAMP1-205ENST00000535927 RND2P52198 227 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 ARL16Q0P5N6 197 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 Q56UQ5 140 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 C19orf35Q6ZS72 473 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 NPIPB3Q92617 1050 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 TRGV9Q99603 122 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 KCNIP2Q9NS61 270 aa12.56□□□□□ -0.4
VAMP1-205ENST00000535927 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 SMLR1H3BR10 107 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 TGOLN2O43493 480 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms