RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PPBPP02775 128 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 UCHL1P09936 223 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 SCGB1A1P11684 91 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 S100GP29377 79 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 CASP1P29466 404 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 NCAPD3P42695 1498 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 PSMD8P48556 350 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 TPI1P60174 286 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 S100A12P80511 92 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 CAMSAP2Q08AD1 1489 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 RRN3P1Q2M238 152 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 SCGB2B2Q4G0G5 96 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 DEFB134Q4QY38 66 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 TMEM128Q5BJH2 165 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 LYRM7Q5U5X0 104 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 SAMD13Q5VXD3 122 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 ZNF705AQ6ZN79 300 aaPredicted RBP1.53□□□□□ -2.16
VBP1-203ENST00000535916 ZNF767PQ75MW2 155 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 MIR17HGQ75NE6 70 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 SLX4Q8IY92 1834 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 C12orf29Q8N999 325 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 NUP35Q8NFH5 326 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 PFN4Q8NHR9 129 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 DCANP1Q8TF63 244 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 DYDC1Q8WWB3 177 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 SLAMF6Q96DU3 332 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 IMMP2LQ96T52 175 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 TUBA4BQ9H853 241 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 MRPL16Q9NX20 251 aaKnown RBP1.53□□□□□ -2.16
VBP1-203ENST00000535916 HSPB11Q9Y547 144 aa1.53□□□□□ -2.16
VBP1-203ENST00000535916 THADAQ6YHU6 1953 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 CPDO75976 1380 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 KIF24Q5T7B8 1368 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 TRAV7A0A075B6U4 112 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 A0A0J9YX75 114 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 A0A1W2PNN7 141 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 E7EQ34 232 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 M0R378 163 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 CYB5BO43169 146 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 CLPSP04118 112 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 RNASE4P34096 147 aaKnown RBP1.52□□□□□ -2.17
VBP1-203ENST00000535916 YPEL3P61236 119 aaPredicted RBP1.52□□□□□ -2.17
VBP1-203ENST00000535916 SUPT4H1P63272 117 aaKnown RBP1.52□□□□□ -2.17
VBP1-203ENST00000535916 PYDC2Q56P42 97 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 LYZL1Q6UWQ5 148 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 LHFPL1Q86WI0 220 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 RPP25LQ8N5L8 163 aaKnown RBP1.52□□□□□ -2.17
VBP1-203ENST00000535916 TMEM35BQ8NCS4 154 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 ST6GALNAC3Q8NDV1 305 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 OR51T1Q8NGJ9 327 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 OR4C16Q8NGL9 310 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 GRPEL2Q8TAA5 225 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 CMTM2Q8TAZ6 248 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 WFDC5Q8TCV5 224 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 THEM6Q8WUY1 208 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 SKA2Q8WVK7 121 aaPredicted RBP1.52□□□□□ -2.17
VBP1-203ENST00000535916 SCGB3A1Q96QR1 104 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 EFCAB11Q9BUY7 163 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 RTL8AQ9BWD3 113 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 SLC39A9Q9NUM3 307 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 PSORS1C2Q9UIG4 136 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 OR52A1Q9UKL2 312 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 PCTPQ9UKL6 214 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 NYNRINQ9P2P1 1898 aaKnown RBP1.52□□□□□ -2.17
VBP1-203ENST00000535916 KIF13BQ9NQT8 1826 aa1.52□□□□□ -2.17
VBP1-203ENST00000535916 TRPM1Q7Z4N2 1603 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 KDM5BQ9UGL1 1544 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 SCAF11Q99590 1463 aaKnown RBP1.51□□□□□ -2.17
VBP1-203ENST00000535916 CACNA1DQ01668 2161 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 ATG2BQ96BY7 2078 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 ARHGEF10O15013 1369 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 LCTP09848 1927 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 IGLV10-54A0A075B6I4 117 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 DUXBA0A1W2PPF3 345 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 MEIS3P1A6NDR6 274 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 C1orf196B1AJZ1 125 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 G3V3Q6 166 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 KPNA4O00629 521 aaPredicted RBP1.51□□□□□ -2.17
VBP1-203ENST00000535916 TAX1BP3O14907 124 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 ARPC5O15511 151 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 DHFRP00374 187 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 TRGC2P03986 189 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 DEFA4P12838 97 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 S100A4P26447 101 aaKnown RBP1.51□□□□□ -2.17
VBP1-203ENST00000535916 INSL3P51460 131 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 EMP1P54849 157 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 BAMBIQ13145 260 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 FAM27BQ5VT28 67 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 Q6ZS52 159 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 CLVS1Q8IUQ0 354 aaPredicted RBP1.51□□□□□ -2.17
VBP1-203ENST00000535916 HIST3H2BBQ8N257 126 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 SIGLECL1Q8N7X8 197 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 STAG3L4Q8TBR4 150 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 C11orf40Q8WZ69 217 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 CARD19Q96LW7 228 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 GPX7Q96SL4 187 aaPredicted RBP1.51□□□□□ -2.17
VBP1-203ENST00000535916 PKMYT1Q99640 499 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 OR2J1Q9GZK6 312 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 NAT8Q9UHE5 227 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 HHLA3Q9XRX5 114 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms