RNA–Protein interactions for RNA: ENST00000535011.6

CALU-205, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 3,210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-205ENST00000535011 TMEM14BQ9NUH8 114 aa13.34□□□□□ -0.27
CALU-205ENST00000535011 ST6GALNAC3Q8NDV1 305 aa13.34□□□□□ -0.27
CALU-205ENST00000535011 NPIPB3Q92617 1050 aa13.34□□□□□ -0.27
CALU-205ENST00000535011 CENPVQ7Z7K6 275 aaPredicted RBP13.34□□□□□ -0.27
CALU-205ENST00000535011 TMEM106BQ9NUM4 274 aa13.34□□□□□ -0.27
CALU-205ENST00000535011 ZFYVE26Q68DK2 2539 aa13.33□□□□□ -0.27
CALU-205ENST00000535011 GATCO43716 136 aaKnown RBP13.33□□□□□ -0.28
CALU-205ENST00000535011 FAM168AQ92567 244 aa13.33□□□□□ -0.28
CALU-205ENST00000535011 MRPL36Q9P0J6 103 aaKnown RBP13.33□□□□□ -0.28
CALU-205ENST00000535011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.288e-11■■■□□ 17.1
CALU-205ENST00000535011 VPS13CQ709C8 3753 aa13.33□□□□□ -0.28
CALU-205ENST00000535011 NDUFB3O43676 98 aa13.33□□□□□ -0.28
CALU-205ENST00000535011 OR5AU1Q8NGC0 362 aa13.33□□□□□ -0.28
CALU-205ENST00000535011 TUBG2Q9NRH3 451 aa13.33□□□□□ -0.28
CALU-205ENST00000535011 ZNF355PQ9NSJ1 428 aa13.33□□□□□ -0.28
CALU-205ENST00000535011 NAGKQ9UJ70 344 aa13.33□□□□□ -0.28
CALU-205ENST00000535011 E7EQL1 145 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 GGCTO75223 188 aaKnown RBP13.32□□□□□ -0.28
CALU-205ENST00000535011 TFPI2P48307 235 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 AMTP48728 403 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 SLC25A48Q6ZT89 311 aaKnown RBP13.32□□□□□ -0.28
CALU-205ENST00000535011 TCTEX1D1Q8N7M0 179 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 CACNA1AO00555 2505 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 UPK2O00526 184 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 APOA2P02652 100 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 LINC00869P0C866 280 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 CFHR2P36980 270 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 TIGITQ495A1 244 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 GBGT1Q8N5D6 347 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 PARD6GQ9BYG4 376 aaPredicted RBP13.32□□□□□ -0.28
CALU-205ENST00000535011 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.32□□□□□ -0.28
CALU-205ENST00000535011 A8MWP6 167 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 SRP14P37108 136 aaKnown RBP13.32□□□□□ -0.28
CALU-205ENST00000535011 CDSNQ15517 529 aa13.32□□□□□ -0.28
CALU-205ENST00000535011 FLYWCH2Q96CP2 140 aaKnown RBP13.32□□□□□ -0.28
CALU-205ENST00000535011 EAF1Q96JC9 268 aaPredicted RBP13.32□□□□□ -0.28
CALU-205ENST00000535011 OR1B1Q8NGR6 318 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 ZNF253O75346 499 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 MT-CO2P00403 227 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 SRIP30626 198 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 GATA4P43694 442 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 TDGF1P3P51864 188 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 TCTAP57738 103 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 RPEL1Q2QD12 228 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 FOXA2Q9Y261 457 aaPredicted RBP13.31□□□□□ -0.28
CALU-205ENST00000535011 POLR3KQ9Y2Y1 108 aaPredicted RBP13.31□□□□□ -0.28
CALU-205ENST00000535011 RNF114Q9Y508 228 aa13.31□□□□□ -0.28
CALU-205ENST00000535011 TMEM178BH3BS89 294 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 M0QZ24 198 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 ZNF137PP52743 207 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 RPL8P62917 257 aaKnown RBP13.3□□□□□ -0.28
CALU-205ENST00000535011 FAM222BQ8WU58 562 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 RNASE6Q93091 150 aaKnown RBP13.3□□□□□ -0.28
CALU-205ENST00000535011 TPPP3Q9BW30 176 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 GAL3ST2Q9H3Q3 398 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 ZNF430Q9H8G1 570 aaPredicted RBP13.3□□□□□ -0.28
CALU-205ENST00000535011 LSM4Q9Y4Z0 139 aaKnown RBP13.3□□□□□ -0.28
CALU-205ENST00000535011 A0A1W2PN81 502 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 H0YJW9 148 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 TCAPO15273 167 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 TGOLN2O43493 480 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 WT1-ASQ06250 92 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 LRRC10Q5BKY1 277 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 RCHY1Q96PM5 261 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 GGTLC3B5MD39 225 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 COX7A2P2O60397 106 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 TBR1Q16650 682 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 Q6ZWC4 215 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 ERASQ7Z444 233 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 PRNDQ9UKY0 176 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 LINC00312Q9Y6C7 94 aa13.3□□□□□ -0.28
CALU-205ENST00000535011 VENTXO95231 258 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 PMCHL1Q16048 86 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 TNXAQ16473 311 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 FAM169BQ8N8A8 192 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 FNDC4Q9H6D8 234 aaPredicted RBP13.29□□□□□ -0.28
CALU-205ENST00000535011 CUBNO60494 3623 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 A0A1B0GWJ7 208 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 KIR2DS2P43631 304 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 FOXA3P55318 350 aaPredicted RBP13.29□□□□□ -0.28
CALU-205ENST00000535011 RPL15P61313 204 aaKnown RBP13.29□□□□□ -0.28
CALU-205ENST00000535011 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 PYGO2Q9BRQ0 406 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 MCRIP2Q9BUT9 160 aaKnown RBP13.29□□□□□ -0.28
CALU-205ENST00000535011 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
CALU-205ENST00000535011 CORTO00230 105 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 AREGP15514 252 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 LCN12Q6JVE5 192 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 SIGLECL1Q8N7X8 197 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 RNASE2P10153 161 aaKnown RBP13.28□□□□□ -0.28
CALU-205ENST00000535011 IBA57Q5T440 356 aaKnown RBP13.28□□□□□ -0.28
CALU-205ENST00000535011 SLC35E1Q96K37 410 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 SNHG12Q9BXW3 62 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 GNB4Q9HAV0 340 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 IGHV3OR16-8A0A075B7F1 116 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 ZNF25P17030 456 aaPredicted RBP13.28□□□□□ -0.28
CALU-205ENST00000535011 LOXP28300 417 aaPredicted RBP13.28□□□□□ -0.28
CALU-205ENST00000535011 CR1LQ2VPA4 569 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 TMEM68Q96MH6 324 aa13.28□□□□□ -0.28
CALU-205ENST00000535011 MFAP2P55001 183 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms