RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 LPCAT3Q6P1A2 487 aa15.44■□□□□ 0.06
SSH3-211ENST00000534112 TBC1D26Q86UD7 250 aa15.44■□□□□ 0.06
SSH3-211ENST00000534112 TMEM231Q9H6L2 316 aa15.44■□□□□ 0.06
SSH3-211ENST00000534112 COMMD3Q9UBI1 195 aa15.44■□□□□ 0.06
SSH3-211ENST00000534112 H3BMQ9 156 aa15.43■□□□□ 0.06
SSH3-211ENST00000534112 NOL3O60936 208 aaKnown RBP15.43■□□□□ 0.06
SSH3-211ENST00000534112 TMEM50AO95807 157 aa15.43■□□□□ 0.06
SSH3-211ENST00000534112 SPP1P10451 314 aa15.43■□□□□ 0.06
SSH3-211ENST00000534112 HLA-DMAP28067 261 aa15.43■□□□□ 0.06
SSH3-211ENST00000534112 MORN3Q6PF18 240 aaPredicted RBP15.43■□□□□ 0.06
SSH3-211ENST00000534112 AP3S1Q92572 193 aa15.43■□□□□ 0.06
SSH3-211ENST00000534112 MRGPRFQ96AM1 343 aa15.43■□□□□ 0.06
SSH3-211ENST00000534112 X6R8D5 127 aa15.43■□□□□ 0.06
SSH3-211ENST00000534112 DYNC1H1Q14204 4646 aaKnown RBP15.42■□□□□ 0.06
SSH3-211ENST00000534112 ELOA3CA0A087WX78 387 aaPredicted RBP15.42■□□□□ 0.06
SSH3-211ENST00000534112 A0A1B0GVY2 172 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 K7EQG2 157 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 C4BPBP20851 252 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 NPPCP23582 126 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 PRSS3P35030 304 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 SPINK9Q5DT21 86 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 CENPSQ8N2Z9 138 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 DYNC2LI1Q8TCX1 351 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 RNF126Q9BV68 326 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 DNAH11Q96DT5 4516 aa15.42■□□□□ 0.06
SSH3-211ENST00000534112 A0A1W2PS18 150 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 KNCNA6PVL3 124 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 APOA1P02647 267 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 SNCAP37840 140 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 TSPAN5P62079 268 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 IZUMO4Q1ZYL8 232 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 MZT2AQ6P582 158 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 STXBP6Q8NFX7 210 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 GRAMD2BQ96HH9 432 aa15.41■□□□□ 0.06
SSH3-211ENST00000534112 RBM38Q9H0Z9 239 aaKnown RBP15.41■□□□□ 0.06
SSH3-211ENST00000534112 HPGDSO60760 199 aa15.4■□□□□ 0.06
SSH3-211ENST00000534112 ZNF688P0C7X2 276 aa15.4■□□□□ 0.06
SSH3-211ENST00000534112 PVRIGQ6DKI7 326 aa15.4■□□□□ 0.06
SSH3-211ENST00000534112 CLEC5AQ9NY25 188 aa15.4■□□□□ 0.06
SSH3-211ENST00000534112 CCDC59Q9P031 241 aaKnown RBP15.4■□□□□ 0.06
SSH3-211ENST00000534112 AGRNO00468 2067 aa15.4■□□□□ 0.06
SSH3-211ENST00000534112 MED14OSP0DP75 135 aa15.39■□□□□ 0.05
SSH3-211ENST00000534112 ELK1P19419 428 aa15.39■□□□□ 0.05
SSH3-211ENST00000534112 CRYBB3P26998 211 aa15.39■□□□□ 0.05
SSH3-211ENST00000534112 CSNK1G2-AS1Q8NCQ2 148 aa15.39■□□□□ 0.05
SSH3-211ENST00000534112 METTL26Q96S19 204 aa15.39■□□□□ 0.05
SSH3-211ENST00000534112 TBC1D24Q9ULP9 559 aa15.39■□□□□ 0.05
SSH3-211ENST00000534112 INS-IGF2F8WCM5 200 aa15.38■□□□□ 0.05
SSH3-211ENST00000534112 P2RY1P47900 373 aa15.38■□□□□ 0.05
SSH3-211ENST00000534112 PPP5CP53041 499 aa15.38■□□□□ 0.05
SSH3-211ENST00000534112 UCP3P55916 312 aa15.38■□□□□ 0.05
SSH3-211ENST00000534112 ACTL10Q5JWF8 245 aa15.38■□□□□ 0.05
SSH3-211ENST00000534112 DCANP1Q8TF63 244 aa15.38■□□□□ 0.05
SSH3-211ENST00000534112 MRPL36Q9P0J6 103 aaKnown RBP15.38■□□□□ 0.05
SSH3-211ENST00000534112 A0A0B4J293 547 aa15.37■□□□□ 0.05
SSH3-211ENST00000534112 CCDC160A6NGH7 325 aa15.37■□□□□ 0.05
SSH3-211ENST00000534112 CLN5O75503 358 aa15.37■□□□□ 0.05
SSH3-211ENST00000534112 C12orf74Q32Q52 190 aa15.37■□□□□ 0.05
SSH3-211ENST00000534112 POM121L12Q8N7R1 296 aa15.37■□□□□ 0.05
SSH3-211ENST00000534112 GPX8Q8TED1 209 aa15.37■□□□□ 0.05
SSH3-211ENST00000534112 CELA1Q9UNI1 258 aa15.37■□□□□ 0.05
SSH3-211ENST00000534112 DEFB131BA0A096LNP1 70 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 CORTO00230 105 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 IGKV1-5P01602 117 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 AMBPP02760 352 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 RNASE2P10153 161 aaKnown RBP15.36■□□□□ 0.05
SSH3-211ENST00000534112 SUB1P53999 127 aaKnown RBP eCLIP15.36■□□□□ 0.05
SSH3-211ENST00000534112 MLANAQ16655 118 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 ZNF767PQ75MW2 155 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 SLC35G3Q8N808 338 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 TMEM230Q96A57 120 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 MIXL1Q9H2W2 232 aa15.36■□□□□ 0.05
SSH3-211ENST00000534112 FNDC4Q9H6D8 234 aaPredicted RBP15.36■□□□□ 0.05
SSH3-211ENST00000534112 RSL24D1Q9UHA3 163 aaKnown RBP15.36■□□□□ 0.05
SSH3-211ENST00000534112 SMIM31A0A1B0GVY4 71 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 PRSS29PA6NIE9 313 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 FAM25AB3EWG3 89 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 FAM25CB3EWG5 89 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 FAM25GB3EWG6 89 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 ZNF701M0R085 212 aaPredicted RBP15.35■□□□□ 0.05
SSH3-211ENST00000534112 IFNA17P01571 189 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 P0C879 139 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 P0DMU3 169 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 FAM231AP0DMU4 169 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 FAM231CP0DMU5 169 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 OR4X1Q8NH49 305 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 NARS2Q96I59 477 aaKnown RBP15.35■□□□□ 0.05
SSH3-211ENST00000534112 RAB40CQ96S21 281 aa15.35■□□□□ 0.05
SSH3-211ENST00000534112 SLIRPQ9GZT3 109 aaKnown RBP15.35■□□□□ 0.05
SSH3-211ENST00000534112 PKD1P98161 4303 aa15.34■□□□□ 0.05
SSH3-211ENST00000534112 RTL8CO15255 209 aa15.34■□□□□ 0.05
SSH3-211ENST00000534112 IGKV1-17P01599 117 aa15.34■□□□□ 0.05
SSH3-211ENST00000534112 ETV6P41212 452 aa15.34■□□□□ 0.05
SSH3-211ENST00000534112 M0R2N4 97 aa15.33■□□□□ 0.04
SSH3-211ENST00000534112 CTDSP2O14595 271 aa15.33■□□□□ 0.04
SSH3-211ENST00000534112 OPRK1P41145 380 aa15.33■□□□□ 0.04
SSH3-211ENST00000534112 DHRS2Q13268 280 aa15.33■□□□□ 0.04
SSH3-211ENST00000534112 NDUFAF3Q9BU61 184 aa15.33■□□□□ 0.04
SSH3-211ENST00000534112 SCRT1Q9BWW7 348 aa15.33■□□□□ 0.04
SSH3-211ENST00000534112 EXTL2Q9UBQ6 330 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms