RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 IGHV3-21A0A0B4J1V1 117 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 TRIM77I1YAP6 450 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 SEC11BP0C7V7 166 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 PPIFP30405 207 aaKnown RBP12.48□□□□□ -0.41
TRIM3-213ENST00000533309 DEFA5Q01523 94 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 CFHR3Q02985 330 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 TMEM144Q7Z5S9 345 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 Q8N2B8 174 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 SCGB1C1Q8TD33 95 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 GNPNAT1Q96EK6 184 aaPredicted RBP12.48□□□□□ -0.41
TRIM3-213ENST00000533309 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 PRSS22Q9GZN4 317 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 UBQLN2Q9UHD9 624 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 TRBV9A0A0B4J1U6 114 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 RND2P52198 227 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 HILS1P60008 231 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 ETFRF1Q6IPR1 90 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 ZNF418Q8TF45 676 aaPredicted RBP12.48□□□□□ -0.41
TRIM3-213ENST00000533309 ACY3Q96HD9 319 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 MGST2Q99735 147 aa12.48□□□□□ -0.41
TRIM3-213ENST00000533309 SETD2Q9BYW2 2564 aaPredicted RBP12.47□□□□□ -0.41
TRIM3-213ENST00000533309 RPS10-NUDT3A0A1W2PQS6 291 aa12.47□□□□□ -0.41
TRIM3-213ENST00000533309 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
TRIM3-213ENST00000533309 OR2J3O76001 311 aa12.47□□□□□ -0.41
TRIM3-213ENST00000533309 NDUFB8O95169 186 aa12.47□□□□□ -0.41
TRIM3-213ENST00000533309 TEPPQ6URK8 271 aa12.47□□□□□ -0.41
TRIM3-213ENST00000533309 CENPVQ7Z7K6 275 aaPredicted RBP12.47□□□□□ -0.41
TRIM3-213ENST00000533309 TMEM116Q8NCL8 245 aa12.47□□□□□ -0.41
TRIM3-213ENST00000533309 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
TRIM3-213ENST00000533309 PSMG3Q9BT73 122 aaPredicted RBP12.47□□□□□ -0.41
TRIM3-213ENST00000533309 GGTLC1Q9BX51 225 aa12.47□□□□□ -0.41
TRIM3-213ENST00000533309 MFSD2BA6NFX1 497 aa12.46□□□□□ -0.41
TRIM3-213ENST00000533309 MPDU1O75352 247 aa12.46□□□□□ -0.41
TRIM3-213ENST00000533309 RNASE1P07998 156 aaKnown RBP12.46□□□□□ -0.41
TRIM3-213ENST00000533309 HIST1H1BP16401 226 aaKnown RBP12.46□□□□□ -0.41
TRIM3-213ENST00000533309 EIF5AL1Q6IS14 154 aaKnown RBP12.46□□□□□ -0.41
TRIM3-213ENST00000533309 OR2G3Q8NGZ4 309 aa12.46□□□□□ -0.41
TRIM3-213ENST00000533309 TIMM9Q9Y5J7 89 aa12.46□□□□□ -0.41
TRIM3-213ENST00000533309 NIPBLQ6KC79 2804 aaeCLIP12.46□□□□□ -0.42
TRIM3-213ENST00000533309 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
TRIM3-213ENST00000533309 AGPAT2O15120 278 aa12.45□□□□□ -0.42
TRIM3-213ENST00000533309 CYB5BO43169 146 aa12.45□□□□□ -0.42
TRIM3-213ENST00000533309 FAM157CP0CG43 387 aa12.45□□□□□ -0.42
TRIM3-213ENST00000533309 RHOGP84095 191 aa12.45□□□□□ -0.42
TRIM3-213ENST00000533309 TMEM182Q6ZP80 229 aaPredicted RBP12.45□□□□□ -0.42
TRIM3-213ENST00000533309 THAP8Q8NA92 274 aa12.45□□□□□ -0.42
TRIM3-213ENST00000533309 FBXL7Q9UJT9 491 aa12.45□□□□□ -0.42
TRIM3-213ENST00000533309 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
TRIM3-213ENST00000533309 CRLF1O75462 422 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 TSPAN9O75954 239 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 BRI3O95415 125 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 IGLV1-40P01703 118 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 CAMLGP49069 296 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 SULT1A2P50226 295 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 OR4X1Q8NH49 305 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 PCNPQ8WW12 178 aaKnown RBP12.44□□□□□ -0.42
TRIM3-213ENST00000533309 MS4A10Q96PG2 267 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 ZNF355PQ9NSJ1 428 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 SERTAD4Q9NUC0 356 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 THYN1Q9P016 225 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 S4R3C0 116 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 H3BUA1 57 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 OR10J1P30954 320 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 C15orf32Q32M92 178 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 ACSM6Q6P461 480 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 Q6ZSV7 163 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 NECAP1Q8NC96 275 aa12.44□□□□□ -0.42
TRIM3-213ENST00000533309 C2CD3Q4AC94 2353 aa12.43□□□□□ -0.42
TRIM3-213ENST00000533309 NMBP08949 121 aa12.43□□□□□ -0.42
TRIM3-213ENST00000533309 SERF2P84101 59 aa12.43□□□□□ -0.42
TRIM3-213ENST00000533309 C10orf99Q6UWK7 81 aa12.43□□□□□ -0.42
TRIM3-213ENST00000533309 VN1R17PQ8TDU5 208 aa12.43□□□□□ -0.42
TRIM3-213ENST00000533309 VSIRQ9H7M9 311 aa12.43□□□□□ -0.42
TRIM3-213ENST00000533309 SLC45A2Q9UMX9 530 aa12.43□□□□□ -0.42
TRIM3-213ENST00000533309 C17orf112F2Z3M2 114 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 CLN5O75503 358 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 IGHG4P01861 327 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 TRGV3P03979 118 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 IGLC1P0CG04 106 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 RPL15P61313 204 aaKnown RBP12.42□□□□□ -0.42
TRIM3-213ENST00000533309 PRR20EP86478 221 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 PRR20CP86479 221 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 PRR20DP86480 221 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 PRR20BP86481 221 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 PRR20AP86496 221 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 MIC13Q5XKP0 118 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 ZNF329Q86UD4 541 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 ZNF709Q8N972 641 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 KLK15Q9H2R5 256 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 C21orf62Q9NYP8 219 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 PXMP4Q9Y6I8 212 aa12.42□□□□□ -0.42
TRIM3-213ENST00000533309 FAM223BA6NKX1 122 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 YIF1AO95070 293 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 IGHV3-23P01764 117 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 LINC00869P0C866 280 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 RPL29P47914 159 aaKnown RBP12.41□□□□□ -0.42
TRIM3-213ENST00000533309 FHITP49789 147 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 ELLP55199 621 aaPredicted RBP12.41□□□□□ -0.42
TRIM3-213ENST00000533309 ZNF90Q03938 601 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms