RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 HLA-DMAP28067 261 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 S100GP29377 79 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 ETV6P41212 452 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 HSPA13P48723 471 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 TSPAN5P62079 268 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 CADM3Q8N126 398 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 MRGPRFQ96AM1 343 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 S100A16Q96FQ6 103 aaKnown RBP9.34□□□□□ -0.91
COPB1-209ENST00000533096 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 SEC22AQ96IW7 307 aa9.34□□□□□ -0.91
COPB1-209ENST00000533096 MRPL36Q9P0J6 103 aaKnown RBP9.34□□□□□ -0.91
COPB1-209ENST00000533096 A0A0A6YYH2 397 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 HELTA6NFD8 242 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 A6NJ64 397 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 IGKV1-39P01597 117 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 IGKV1D-39P04432 117 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 SPART-AS1P0CW21 52 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 SUB1P53999 127 aaKnown RBP eCLIP9.33□□□□□ -0.92
COPB1-209ENST00000533096 NUTF2P61970 127 aaKnown RBP9.33□□□□□ -0.92
COPB1-209ENST00000533096 TIGITQ495A1 244 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 SPARTQ8N0X7 666 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 ZNF114Q8NC26 417 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 DCANP1Q8TF63 244 aa9.33□□□□□ -0.92
COPB1-209ENST00000533096 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 CRYBB3P26998 211 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 OPRK1P41145 380 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 EIF2B2P49770 351 aaKnown RBP9.32□□□□□ -0.92
COPB1-209ENST00000533096 Q6ZR54 194 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 Q6ZRM9 215 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 LYSMD2Q8IV50 215 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 SLC35G3Q8N808 338 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 MAPKAPK5-AS1Q8N8E1 139 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 C1QTNF4Q9BXJ3 329 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 FXYD6Q9H0Q3 95 aa9.32□□□□□ -0.92
COPB1-209ENST00000533096 CLN5O75503 358 aa9.31□□□□□ -0.92
COPB1-209ENST00000533096 HRH1P35367 487 aa9.31□□□□□ -0.92
COPB1-209ENST00000533096 TAS2R46P59540 309 aa9.31□□□□□ -0.92
COPB1-209ENST00000533096 LPCAT3Q6P1A2 487 aa9.31□□□□□ -0.92
COPB1-209ENST00000533096 IZUMO2Q6UXV1 221 aa9.31□□□□□ -0.92
COPB1-209ENST00000533096 ENY2Q9NPA8 101 aa9.31□□□□□ -0.92
COPB1-209ENST00000533096 ABCA13Q86UQ4 5058 aa9.31□□□□□ -0.92
COPB1-209ENST00000533096 PRSS3P35030 304 aa9.3□□□□□ -0.92
COPB1-209ENST00000533096 HOXA1P49639 335 aaPredicted RBP9.3□□□□□ -0.92
COPB1-209ENST00000533096 SCAND1P57086 179 aa9.3□□□□□ -0.92
COPB1-209ENST00000533096 TAS2R20P59543 309 aa9.3□□□□□ -0.92
COPB1-209ENST00000533096 DEFB1P60022 68 aa9.3□□□□□ -0.92
COPB1-209ENST00000533096 TMEM69Q5SWH9 247 aa9.3□□□□□ -0.92
COPB1-209ENST00000533096 Q8WTZ3 238 aa9.3□□□□□ -0.92
COPB1-209ENST00000533096 PDCD10Q9BUL8 212 aa9.3□□□□□ -0.92
COPB1-209ENST00000533096 FNDC4Q9H6D8 234 aaPredicted RBP9.3□□□□□ -0.92
COPB1-209ENST00000533096 A0A0B4J293 547 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 H3BMM0 161 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 RNASE2P10153 161 aaKnown RBP9.29□□□□□ -0.92
COPB1-209ENST00000533096 PGAM2P15259 253 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 AP2S1P53680 142 aaPredicted RBP9.29□□□□□ -0.92
COPB1-209ENST00000533096 SNRPD3P62318 126 aaKnown RBP9.29□□□□□ -0.92
COPB1-209ENST00000533096 TNP2Q05952 138 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 FAM222AQ5U5X8 452 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 C16orf54Q6UWD8 224 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 GSG1LQ6UXU4 331 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 TMED3Q9Y3Q3 217 aa9.29□□□□□ -0.92
COPB1-209ENST00000533096 FAM90A26D6RGX4 464 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 CORTO00230 105 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 SCGB2A1O75556 95 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 CD74P04233 296 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 HNRNPCP07910 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
COPB1-209ENST00000533096 PI3P19957 117 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 AKR1C2P52895 323 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 DHODHQ02127 395 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 SAMD12Q8N8I0 201 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 OR4X1Q8NH49 305 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 ATG101Q9BSB4 218 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 VCX3BQ9H321 246 aa9.28□□□□□ -0.92
COPB1-209ENST00000533096 TRAV30A0A087WSZ9 112 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 TMEM189A5PLL7 270 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 IGKV1-17P01599 117 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 IGKV1-5P01602 117 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 NAT1P18440 290 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 SP6Q3SY56 376 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 RNF212Q495C1 297 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 OR4B1Q8NGF8 309 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 FAM212BQ9NTI7 297 aaPredicted RBP9.27□□□□□ -0.93
COPB1-209ENST00000533096 DKK2Q9UBU2 259 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 RFNGQ9Y644 331 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 U3KQE9 123 aa9.27□□□□□ -0.93
COPB1-209ENST00000533096 TGFBR1P36897 503 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 RND2P52198 227 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 GABARAPL2P60520 117 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 KCTD21Q4G0X4 260 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 UBE2NLQ5JXB2 153 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 TMEM88Q6PEY1 159 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 RNASE11Q8TAA1 199 aaKnown RBP9.26□□□□□ -0.93
COPB1-209ENST00000533096 GLMPQ8WWB7 406 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 FCGR1BQ92637 280 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 FAM210BQ96KR6 192 aa9.26□□□□□ -0.93
COPB1-209ENST00000533096 C7orf50Q9BRJ6 194 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms