RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 P2RY1P47900 373 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 AP2S1P53680 142 aaPredicted RBP8.34□□□□□ -1.07
CMTM1-216ENST00000533078 GABARAPL2P60520 117 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 TSPAN5P62079 268 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 SNRPD3P62318 126 aaKnown RBP8.34□□□□□ -1.07
CMTM1-216ENST00000533078 C12orf74Q32Q52 190 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 PHLDA2Q53GA4 152 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 LILRB2Q8N423 598 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 OR5H6Q8NGV6 325 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 SLC25A38Q96DW6 304 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 S100A16Q96FQ6 103 aaKnown RBP8.34□□□□□ -1.07
CMTM1-216ENST00000533078 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 ENY2Q9NPA8 101 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 PLA2G2EQ9NZK7 142 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 AGRNO00468 2067 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 TEX48A0A1B0GUV7 120 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 TMEM189A5PLL7 270 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 ATG12O94817 140 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
CMTM1-216ENST00000533078 DHRS2Q13268 280 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 PSMG4Q5JS54 123 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 ZNF767PQ75MW2 155 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 FAM210BQ96KR6 192 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 FXYD6Q9H0Q3 95 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 CELA1Q9UNI1 258 aa8.33□□□□□ -1.08
CMTM1-216ENST00000533078 IGLV2-18A0A075B6J9 118 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 LOC100506127A0A0U1RQW1 187 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 TMEM50AO95807 157 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 SPART-AS1P0CW21 52 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 CRYBB3P26998 211 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 OPRK1P41145 380 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 HOXA1P49639 335 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-216ENST00000533078 TMEM69Q5SWH9 247 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 TBC1D26Q86UD7 250 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 MRGPRFQ96AM1 343 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 SEC22AQ96IW7 307 aa8.32□□□□□ -1.08
CMTM1-216ENST00000533078 TRAV30A0A087WSZ9 112 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 A0A1B0GU03 582 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 RPS10-NUDT3A0A1W2PQS6 291 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 CLN5O75503 358 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 AKR1C2P52895 323 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 SPINK9Q5DT21 86 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 C1orf134Q5TEV5 83 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 IZUMO2Q6UXV1 221 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 CROCCP3Q8IVE0 287 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 CSNK1G2-AS1Q8NCQ2 148 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 DCANP1Q8TF63 244 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 RAB40CQ96S21 281 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 XCL2Q9UBD3 114 aa8.31□□□□□ -1.08
CMTM1-216ENST00000533078 LRP1BQ9NZR2 4599 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 CLEC2LP0C7M8 214 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 PRSS3P35030 304 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 HRH1P35367 487 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 EMP1P54849 157 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 UBE2NLQ5JXB2 153 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 SPARTQ8N0X7 666 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 OR4X1Q8NH49 305 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 RNASE11Q8TAA1 199 aaKnown RBP8.3□□□□□ -1.08
CMTM1-216ENST00000533078 Q8WTZ3 238 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 NRG4Q8WWG1 115 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 RNF167Q9H6Y7 350 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 TMED3Q9Y3Q3 217 aa8.3□□□□□ -1.08
CMTM1-216ENST00000533078 SMIM9A6NGZ8 99 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 INS-IGF2F8WCM5 200 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 GSTZ1O43708 216 aaPredicted RBP8.29□□□□□ -1.08
CMTM1-216ENST00000533078 HNRNPCP07910 306 aaKnown RBP eCLIP8.29□□□□□ -1.08
CMTM1-216ENST00000533078 NAT1P18440 290 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 HLA-DMAP28067 261 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 PPP5CP53041 499 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 TAS2R20P59543 309 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 RNF212Q495C1 297 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 Q6ZRM9 215 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 ZNF575Q86XF7 245 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 SEPSECSQ9HD40 501 aaKnown RBP8.29□□□□□ -1.08
CMTM1-216ENST00000533078 RAB26Q9ULW5 256 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 ANAPC10Q9UM13 185 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 RFNGQ9Y644 331 aa8.29□□□□□ -1.08
CMTM1-216ENST00000533078 IGHV3OR16-12A0A075B7B8 117 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 SMIM31A0A1B0GVY4 71 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 C16orf90A8MZG2 172 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 CD74P04233 296 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 PGAM2P15259 253 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 HTN3P15516 51 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 RPL5P46777 297 aaKnown RBP8.28□□□□□ -1.08
CMTM1-216ENST00000533078 OR1S2Q8NGQ3 325 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 RRNAD1Q96FB5 475 aaKnown RBP8.28□□□□□ -1.08
CMTM1-216ENST00000533078 NEU1Q99519 415 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 NIPSNAP3BQ9BS92 247 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 NRN1Q9NPD7 142 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
CMTM1-216ENST00000533078 IGKV1-39P01597 117 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 IGKV1D-39P04432 117 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 RNASE2P10153 161 aaKnown RBP8.27□□□□□ -1.09
CMTM1-216ENST00000533078 NUP62P37198 522 aaPredicted RBP8.27□□□□□ -1.09
CMTM1-216ENST00000533078 UCP3P55916 312 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 TRIM16LQ309B1 348 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 TIGITQ495A1 244 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 Q6ZR54 194 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 SAMD12Q8N8I0 201 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms