RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ATP5IP56385 69 aaPredicted RBP12.67□□□□□ -0.38
PKP3-209ENST00000533069 TAS2R30P59541 319 aa12.67□□□□□ -0.38
PKP3-209ENST00000533069 TNFRSF9Q07011 255 aa12.67□□□□□ -0.38
PKP3-209ENST00000533069 Q6ZRM9 215 aa12.67□□□□□ -0.38
PKP3-209ENST00000533069 OR2K2Q8NGT1 345 aa12.67□□□□□ -0.38
PKP3-209ENST00000533069 INS-IGF2F8WCM5 200 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 SYNGR2O43760 224 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 MPC2O95563 127 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 C1QBP02746 253 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 OR13C7P0DN81 318 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 SLC25A4P12235 298 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 RPP30P78346 268 aaKnown RBP12.66□□□□□ -0.38
PKP3-209ENST00000533069 PRCDQ00LT1 54 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 WT1-ASQ06250 92 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 PRSS54Q6PEW0 395 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 CLEC19AQ6UXS0 136 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 GPHB5Q86YW7 130 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 OR10W1Q8NGF6 305 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 HINT2Q9BX68 163 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 ENY2Q9NPA8 101 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 NSG2Q9Y328 171 aa12.66□□□□□ -0.38
PKP3-209ENST00000533069 DNAH9Q9NYC9 4486 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 MFSD2BA6NFX1 497 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 E5RGE8 158 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 DEDDO75618 318 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 SCGB1D2O95969 90 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 IGHV3-23P01764 117 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
PKP3-209ENST00000533069 S100A10P60903 97 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 RAB32Q13637 225 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 OR1L6Q8NGR2 347 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 VN1R17PQ8TDU5 208 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 HYLS1Q96M11 299 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 HIPK2Q9H2X6 1198 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 F11RQ9Y624 299 aaKnown RBP12.65□□□□□ -0.38
PKP3-209ENST00000533069 S4R3C0 116 aa12.65□□□□□ -0.38
PKP3-209ENST00000533069 K7EPK0 472 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 L7N2F9 121 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 OR2C1O95371 312 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 LYL1P12980 280 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 NUP62P37198 522 aaPredicted RBP12.64□□□□□ -0.39
PKP3-209ENST00000533069 VAMP2P63027 116 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 IZUMO4Q1ZYL8 232 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 ZFP69Q49AA0 526 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 FAM106AQ4KMX7 169 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 NOXA1Q86UR1 476 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 ZNF502Q8TBZ5 544 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 DTD1Q8TEA8 209 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 ATP6V0BQ99437 205 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 PLEKHA3Q9HB20 300 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 U3KQK5 164 aa12.64□□□□□ -0.39
PKP3-209ENST00000533069 C2orf70A6NJV1 201 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 HMSDA8MTL9 139 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 CEBPZOSA8MTT3 80 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 A8MWP6 167 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 A8MZ25 164 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 TSC22D2O75157 780 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 CLEC3BP05452 202 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 FRMD6-AS1P0C7T7 363 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 Q8N1Y9 231 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 DYNLRB2Q8TF09 96 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 SMIM8Q96KF7 97 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 ASCL2Q99929 193 aa12.63□□□□□ -0.39
PKP3-209ENST00000533069 TECRQ9NZ01 308 aaKnown RBP12.63□□□□□ -0.39
PKP3-209ENST00000533069 LSM5Q9Y4Y9 91 aaKnown RBP12.63□□□□□ -0.39
PKP3-209ENST00000533069 FOLR2P14207 255 aa12.62□□□□□ -0.39
PKP3-209ENST00000533069 GPR183P32249 361 aa12.62□□□□□ -0.39
PKP3-209ENST00000533069 P2RY1P47900 373 aa12.62□□□□□ -0.39
PKP3-209ENST00000533069 HOXA1P49639 335 aaPredicted RBP12.62□□□□□ -0.39
PKP3-209ENST00000533069 ERHP84090 104 aaKnown RBP12.62□□□□□ -0.39
PKP3-209ENST00000533069 LRRC37A5PQ49AS3 106 aa12.62□□□□□ -0.39
PKP3-209ENST00000533069 SLC25A24Q6NUK1 477 aa12.62□□□□□ -0.39
PKP3-209ENST00000533069 WWC2-AS2Q96NR7 200 aa12.62□□□□□ -0.39
PKP3-209ENST00000533069 RBKSQ9H477 322 aa12.62□□□□□ -0.39
PKP3-209ENST00000533069 RCL1Q9Y2P8 373 aaKnown RBP12.62□□□□□ -0.39
PKP3-209ENST00000533069 U3KQ87 197 aa12.62□□□□□ -0.39
PKP3-209ENST00000533069 SSSCA1O60232 199 aa12.61□□□□□ -0.39
PKP3-209ENST00000533069 IGHV4-30-4P0DP06 118 aa12.61□□□□□ -0.39
PKP3-209ENST00000533069 C4BPBP20851 252 aa12.61□□□□□ -0.39
PKP3-209ENST00000533069 HTR2BP41595 481 aa12.61□□□□□ -0.39
PKP3-209ENST00000533069 SUB1P53999 127 aaKnown RBP eCLIP12.61□□□□□ -0.39
PKP3-209ENST00000533069 POLR2GP62487 172 aaKnown RBP eCLIP12.61□□□□□ -0.39
PKP3-209ENST00000533069 ADAMTSL5Q6ZMM2 481 aa12.61□□□□□ -0.39
PKP3-209ENST00000533069 INO80EQ8NBZ0 244 aaPredicted RBP12.61□□□□□ -0.39
PKP3-209ENST00000533069 OR1P1Q8NH06 330 aa12.61□□□□□ -0.39
PKP3-209ENST00000533069 WDR89Q96FK6 387 aaPredicted RBP12.61□□□□□ -0.39
PKP3-209ENST00000533069 SLC25A31Q9H0C2 315 aa12.61□□□□□ -0.39
PKP3-209ENST00000533069 HEYLQ9NQ87 328 aaPredicted RBP12.61□□□□□ -0.39
PKP3-209ENST00000533069 MBD2Q9UBB5 411 aa12.61□□□□□ -0.39
PKP3-209ENST00000533069 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 ZNF320A2RRD8 509 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 TGOLN2O43493 480 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 MFAP2P55001 183 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 DEFB114Q30KQ6 69 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 CD300EQ496F6 205 aaPredicted RBP12.6□□□□□ -0.39
PKP3-209ENST00000533069 SPSB3Q6PJ21 355 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 ZNF546Q86UE3 836 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 SBSPONQ8IVN8 264 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 OR2C3Q8N628 320 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms