RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ACOT7LQ6ZUV0 252 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 TMUB2Q71RG4 321 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 PINX1Q96BK5 328 aaKnown RBP8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 RAX2Q96IS3 184 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 LINC01619G3V211 115 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 G3V3Q6 166 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 MT-CO2P00403 227 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 IGHV3-23P01764 117 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 MBPP02686 304 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 CLEC3BP05452 202 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 IAPPP10997 89 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 NPY1RP25929 384 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 RAB11AP62491 216 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 ZNF616Q08AN1 781 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 Q5BKY6 102 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 PRR31Q5SQ13 230 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 CLEC19AQ6UXS0 136 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 RNASEH2CQ8TDP1 164 aaKnown RBP8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 SCARB1Q8WTV0 552 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 PPP1R1CQ8WVI7 109 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 PHYHIPLQ96FC7 376 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 DUX3Q96PT4 197 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 RAB40CQ96S21 281 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 C21orf62Q9NYP8 219 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 S4R3C0 116 aa8.68□□□□□ -1.02
TRAPPC4-211ENST00000533012 IGHV4OR15-8A0A075B7B6 117 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 A0A087WW49 117 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 IGHV3-21A0A0B4J1V1 117 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 RPS10-NUDT3A0A1W2PQS6 291 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 MFSD2BA6NFX1 497 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 I3L2K1 104 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 K7EIM0 57 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 SSSCA1O60232 199 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 IFNA4P05014 189 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 OR8U8P0C7N1 319 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 ZP3P21754 424 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 MFAP4P55083 255 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 CLLU1Q5K131 121 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 SPANXN5Q5MJ07 72 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 KCNRGQ8N5I3 272 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 ZNF502Q8TBZ5 544 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 LRRC20Q8TCA0 184 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 SMIM8Q96KF7 97 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 ATP6V0BQ99437 205 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 TXN2Q99757 166 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 GAR1Q9NY12 217 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 PSENENQ9NZ42 101 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 TNFSF18Q9UNG2 199 aa8.67□□□□□ -1.02
TRAPPC4-211ENST00000533012 TET2Q6N021 2002 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 BCL2L11O43521 198 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 GGCTO75223 188 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 MPC2O95563 127 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 TRBV12-3P01733 135 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 CXCL2P19875 107 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 PVALBP20472 110 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 OPRK1P41145 380 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 TAS2R30P59541 319 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 VAMP2P63027 116 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 IL15RAQ13261 267 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 FHL3Q13643 280 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 Q56UQ5 140 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 ETFRF1Q6IPR1 90 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 EIF5AL1Q6IS14 154 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 PRSS54Q6PEW0 395 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 TREML4Q6UXN2 200 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 ETV3LQ6ZN32 361 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 UBAC2Q8NBM4 344 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 WDR89Q96FK6 387 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 CCDC140Q96MF4 163 aa8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 STRAPQ9Y3F4 350 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 LSM5Q9Y4Y9 91 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-211ENST00000533012 LINC00862A6NCI5 91 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 K7EPK0 472 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 TAAR5O14804 337 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 IGHV3-48P01763 117 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 CD33P20138 364 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 FCGR2BP31994 310 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 GPR183P32249 361 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 ARL3P36405 182 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 NPBWR1P48145 328 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 PAX9P55771 341 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 S100A10P60903 97 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 MLANAQ16655 118 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 RPEL1Q2QD12 228 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 ACSM6Q6P461 480 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 LINC00482Q8N8I6 264 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 WFDC9Q8NEX5 89 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 TMEM170AQ8WVE7 144 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 ARPC5LQ9BPX5 153 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 PFDN2Q9UHV9 154 aa8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 RCL1Q9Y2P8 373 aaKnown RBP8.65□□□□□ -1.02
TRAPPC4-211ENST00000533012 TRAV14DV4A0A0A6YYC5 116 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR2T8A6NH00 312 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 C15orf62A8K5M9 175 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 PPP5D1E7EU14 171 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 H3BP45 60 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 BMPR1BO00238 502 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 NUPL2O15504 423 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms