RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 SNX29P2Q8IUI4 249 aa12.41□□□□□ -0.42
CTSB-226ENST00000532656 GRAMD2BQ96HH9 432 aa12.41□□□□□ -0.42
CTSB-226ENST00000532656 METTL26Q96S19 204 aa12.41□□□□□ -0.42
CTSB-226ENST00000532656 X6R8D5 127 aa12.41□□□□□ -0.42
CTSB-226ENST00000532656 A0A0B4J293 547 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 ZNF705EA8MWA4 302 aaPredicted RBP12.4□□□□□ -0.42
CTSB-226ENST00000532656 M0QYG6 137 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 RNASE2P10153 161 aaKnown RBP12.4□□□□□ -0.42
CTSB-226ENST00000532656 PGAM2P15259 253 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 PI3P19957 117 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 AKR1C2P52895 323 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 MLANAQ16655 118 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 ACTL10Q5JWF8 245 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 CENPSQ8N2Z9 138 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 TP53RKQ96S44 253 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 FNDC4Q9H6D8 234 aaPredicted RBP12.4□□□□□ -0.42
CTSB-226ENST00000532656 CELA1Q9UNI1 258 aa12.4□□□□□ -0.42
CTSB-226ENST00000532656 FAT2Q9NYQ8 4349 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 CORTO00230 105 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 CLN5O75503 358 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 CRYBB3P26998 211 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 RCVRNP35243 200 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 OPRK1P41145 380 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 ETV6P41212 452 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 HOXA1P49639 335 aaPredicted RBP12.39□□□□□ -0.43
CTSB-226ENST00000532656 SUB1P53999 127 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTSB-226ENST00000532656 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 LINC00336Q6ZUF6 198 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 DCANP1Q8TF63 244 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 TMEM230Q96A57 120 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 PDCD10Q9BUL8 212 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 COMMD3Q9UBI1 195 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 TBC1D24Q9ULP9 559 aa12.39□□□□□ -0.43
CTSB-226ENST00000532656 DNAH2Q9P225 4427 aa12.38□□□□□ -0.43
CTSB-226ENST00000532656 PKHD1P08F94 4074 aa12.38□□□□□ -0.43
CTSB-226ENST00000532656 INS-IGF2F8WCM5 200 aa12.38□□□□□ -0.43
CTSB-226ENST00000532656 P0C879 139 aa12.38□□□□□ -0.43
CTSB-226ENST00000532656 KCTD21Q4G0X4 260 aa12.38□□□□□ -0.43
CTSB-226ENST00000532656 OR4X1Q8NH49 305 aa12.38□□□□□ -0.43
CTSB-226ENST00000532656 NARS2Q96I59 477 aaKnown RBP12.38□□□□□ -0.43
CTSB-226ENST00000532656 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
CTSB-226ENST00000532656 SCPEP1Q9HB40 452 aa12.38□□□□□ -0.43
CTSB-226ENST00000532656 SMIM31A0A1B0GVY4 71 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 IGKV1-17P01599 117 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 PIGPP57054 158 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 RND3P61587 244 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 DHRS2Q13268 280 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 TIGITQ495A1 244 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 RNASE12Q5GAN4 147 aaKnown RBP12.37□□□□□ -0.43
CTSB-226ENST00000532656 CSNK1G2-AS1Q8NCQ2 148 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 YIPF6Q96EC8 236 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 ENY2Q9NPA8 101 aa12.37□□□□□ -0.43
CTSB-226ENST00000532656 DEFB131BA0A096LNP1 70 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 A0A0G2JRQ6 117 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 A0A1B0GVY2 172 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 SCGB2A1O75556 95 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 APOA1P02647 267 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 TRIM16LQ309B1 348 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 C12orf74Q32Q52 190 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 RAB40CQ96S21 281 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 SCRT1Q9BWW7 348 aa12.36□□□□□ -0.43
CTSB-226ENST00000532656 C3orf85A0A1B0GTC6 90 aa12.35□□□□□ -0.43
CTSB-226ENST00000532656 HELTA6NFD8 242 aa12.35□□□□□ -0.43
CTSB-226ENST00000532656 AMBPP02760 352 aa12.35□□□□□ -0.43
CTSB-226ENST00000532656 SP6Q3SY56 376 aa12.35□□□□□ -0.43
CTSB-226ENST00000532656 ZNF486Q96H40 463 aaPredicted RBP12.35□□□□□ -0.43
CTSB-226ENST00000532656 M0R2N4 97 aa12.34□□□□□ -0.43
CTSB-226ENST00000532656 HPGDSO60760 199 aa12.34□□□□□ -0.43
CTSB-226ENST00000532656 ATG12O94817 140 aa12.34□□□□□ -0.43
CTSB-226ENST00000532656 ELK1P19419 428 aa12.34□□□□□ -0.43
CTSB-226ENST00000532656 RPL5P46777 297 aaKnown RBP12.34□□□□□ -0.43
CTSB-226ENST00000532656 EIF2B2P49770 351 aaKnown RBP12.34□□□□□ -0.43
CTSB-226ENST00000532656 RNASE10Q5GAN6 216 aaKnown RBP12.34□□□□□ -0.43
CTSB-226ENST00000532656 LHFPL1Q86WI0 220 aa12.34□□□□□ -0.43
CTSB-226ENST00000532656 RNASE11Q8TAA1 199 aaKnown RBP12.34□□□□□ -0.43
CTSB-226ENST00000532656 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
CTSB-226ENST00000532656 XCL2Q9UBD3 114 aa12.34□□□□□ -0.43
CTSB-226ENST00000532656 CD3DP04234 171 aa12.33□□□□□ -0.44
CTSB-226ENST00000532656 BSXQ3C1V8 233 aa12.33□□□□□ -0.44
CTSB-226ENST00000532656 C16orf54Q6UWD8 224 aa12.33□□□□□ -0.44
CTSB-226ENST00000532656 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
CTSB-226ENST00000532656 RRNAD1Q96FB5 475 aaKnown RBP12.33□□□□□ -0.44
CTSB-226ENST00000532656 KLK11Q9UBX7 282 aa12.33□□□□□ -0.44
CTSB-226ENST00000532656 U3KQE9 123 aa12.33□□□□□ -0.44
CTSB-226ENST00000532656 TRAV30A0A087WSZ9 112 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 PRSS29PA6NIE9 313 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 HNRNPCP07910 306 aaKnown RBP eCLIP12.32□□□□□ -0.441e-6■■□□□ 13.5
CTSB-226ENST00000532656 IGLC1P0CG04 106 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 P0DMU3 169 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 FAM231AP0DMU4 169 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 FAM231CP0DMU5 169 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 RND2P52198 227 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 NCS1P62166 190 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 Q6ZRM9 215 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 NDUFAF3Q9BU61 184 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 COPZ2Q9P299 210 aa12.32□□□□□ -0.44
CTSB-226ENST00000532656 RPS10-NUDT3A0A1W2PQS6 291 aa12.31□□□□□ -0.44
CTSB-226ENST00000532656 FAM90A26D6RGX4 464 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms