RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 ENY2Q9NPA8 101 aa10.53□□□□□ -0.72
TSPAN4-220ENST00000532375 TRAV6A0A075B6T7 132 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 ZNF320A2RRD8 509 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 FAM90A26D6RGX4 464 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 CORTO00230 105 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 ID3Q02535 119 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 CD300EQ496F6 205 aaPredicted RBP10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 UXS1Q8NBZ7 420 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 SLC24A4Q8NFF2 622 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 OR1S1Q8NH92 325 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 DTD1Q8TEA8 209 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 NUDT15Q9NV35 164 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 GAR1Q9NY12 217 aaKnown RBP10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 MLXQ9UH92 298 aa10.52□□□□□ -0.73
TSPAN4-220ENST00000532375 K7EMT4 169 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 C4orf46Q504U0 113 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 DEFB121Q5J5C9 76 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 PRSS54Q6PEW0 395 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 DUSP18Q8NEJ0 188 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 OR4X1Q8NH49 305 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 COQ8AQ8NI60 647 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 RNASEH2CQ8TDP1 164 aaKnown RBP10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 HIPK2Q9H2X6 1198 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 MRPL27Q9P0M9 148 aaKnown RBP10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 U3KQ87 197 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 HUWE1Q7Z6Z7 4374 aaKnown RBP10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 COL7A1Q02388 2944 aa10.51□□□□□ -0.73
TSPAN4-220ENST00000532375 FAM240BA0A1B0GVZ2 78 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 C15orf62A8K5M9 175 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 CLN5O75503 358 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 IGKV1-17P01599 117 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 H2AFB2P0C5Z0 115 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 NPY1RP25929 384 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 NPBWR1P48145 328 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 OR4D5Q8NGN0 318 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 SEC22CQ9BRL7 303 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 MAGT1Q9H0U3 335 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 TECRQ9NZ01 308 aaKnown RBP10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 UFC1Q9Y3C8 167 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 SELENOKQ9Y6D0 94 aa10.5□□□□□ -0.73
TSPAN4-220ENST00000532375 IGHV3OR16-8A0A075B7F1 116 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 NUPL2O15504 423 aaKnown RBP10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 GNG7O60262 68 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 LY86O95711 162 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 OPRK1P41145 380 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 ATP5IP56385 69 aaPredicted RBP10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 CD69Q07108 199 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 MZT2BQ6NZ67 158 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 TOMM20LQ6UXN7 152 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 NRARPQ7Z6K4 114 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 TMEM116Q8NCL8 245 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 ZNF431Q8TF32 576 aaPredicted RBP10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 MARC2Q969Z3 335 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 PALMDQ9NP74 551 aa10.49□□□□□ -0.73
TSPAN4-220ENST00000532375 PRSS46E5RG02 174 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 ZNF207O43670 478 aaKnown RBP10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 SYNGR2O43760 224 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 IFNA10P01566 189 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 IGLC1P0CG04 106 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 IAPPP10997 89 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 PAX9P55771 341 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 RELQ04864 619 aaPredicted RBP10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 TMEM61Q8N0U2 210 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 WDR89Q96FK6 387 aaPredicted RBP10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 B9D2Q9BPU9 175 aa10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 DAZ1Q9NQZ3 744 aaKnown RBP10.48□□□□□ -0.73
TSPAN4-220ENST00000532375 IL5P05113 134 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 SLC25A4P12235 298 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 RND2P52198 227 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 POLR2GP62487 172 aaKnown RBP eCLIP10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 BTNL8Q6UX41 500 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 ZNF600Q6ZNG1 722 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 NOXA1Q86UR1 476 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 DYNLRB2Q8TF09 96 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 SMPXQ9UHP9 88 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 SMAD5-AS1Q9Y6J3 95 aa10.47□□□□□ -0.73
TSPAN4-220ENST00000532375 IGHV7-4-1A0A0J9YVY3 117 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 RPS10-NUDT3A0A1W2PQS6 291 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 A8MZ25 164 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 WRBO00258 174 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 MED6O75586 246 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 IFNA21P01568 189 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 GPX4P36969 197 aaPredicted RBP10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 IL15RAQ13261 267 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 TIGITQ495A1 244 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 C12orf45Q8N5I9 185 aaPredicted RBP10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 ZBTB8BQ8NAP8 495 aaPredicted RBP10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 NPIPB3Q92617 1050 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 C19orf73Q9NVV2 129 aa10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 PUS1Q9Y606 427 aaKnown RBP eCLIP10.46□□□□□ -0.73
TSPAN4-220ENST00000532375 IGKV1D-37A0A075B6S9 117 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 TRAV25A0A0B4J276 109 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms