RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 LRTM2Q8N967 370 aa13.12□□□□□ -0.31
CTSB-223ENST00000532370 GAR1Q9NY12 217 aaKnown RBP13.12□□□□□ -0.31
CTSB-223ENST00000532370 A0A1B0GU03 582 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 CENPXA8MT69 81 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 GNG7O60262 68 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 YIF1AO95070 293 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 ANXA7P20073 488 aaKnown RBP13.11□□□□□ -0.31
CTSB-223ENST00000532370 OPRK1P41145 380 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 HTR2BP41595 481 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 ELLP55199 621 aaPredicted RBP13.11□□□□□ -0.31
CTSB-223ENST00000532370 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 RBKSQ9H477 322 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 DAZ1Q9NQZ3 744 aaKnown RBP13.11□□□□□ -0.31
CTSB-223ENST00000532370 MRPL27Q9P0M9 148 aaKnown RBP13.11□□□□□ -0.31
CTSB-223ENST00000532370 HSPB7Q9UBY9 170 aa13.11□□□□□ -0.31
CTSB-223ENST00000532370 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 CORTO00230 105 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 PITX3O75364 302 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 UPK1BO75841 260 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 SCAF4O95104 1147 aaKnown RBP13.1□□□□□ -0.31
CTSB-223ENST00000532370 HOXB5P09067 269 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 CD7P09564 240 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 NPBWR1P48145 328 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 RELQ04864 619 aaPredicted RBP13.1□□□□□ -0.31
CTSB-223ENST00000532370 C2orf83Q53S99 150 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 GTSCR1Q86UQ5 136 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 SLC24A4Q8NFF2 622 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 OR1S1Q8NH92 325 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 MARC2Q969Z3 335 aa13.1□□□□□ -0.31
CTSB-223ENST00000532370 DUXBA0A1W2PPF3 345 aa13.09□□□□□ -0.31
CTSB-223ENST00000532370 TMEM50AO95807 157 aa13.09□□□□□ -0.31
CTSB-223ENST00000532370 CD81P60033 236 aa13.09□□□□□ -0.31
CTSB-223ENST00000532370 DTD1Q8TEA8 209 aa13.09□□□□□ -0.31
CTSB-223ENST00000532370 WFDC10AQ9H1F0 79 aa13.09□□□□□ -0.31
CTSB-223ENST00000532370 HIPK2Q9H2X6 1198 aa13.09□□□□□ -0.31
CTSB-223ENST00000532370 C19orf73Q9NVV2 129 aa13.09□□□□□ -0.31
CTSB-223ENST00000532370 IGHV3-49A0A0A0MS15 119 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 C15orf62A8K5M9 175 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 K7EMT4 169 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 LYRM1O43325 122 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 OR4E1P0C645 316 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 NHLRC4P0CG21 123 aaPredicted RBP13.08□□□□□ -0.32
CTSB-223ENST00000532370 UBE2MP61081 183 aaKnown RBP13.08□□□□□ -0.32
CTSB-223ENST00000532370 DHRS2Q13268 280 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 ASAH1Q13510 395 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 GGNBP1Q5YKI7 109 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 TOMM20LQ6UXN7 152 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 OR4X1Q8NH49 305 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 CACFD1Q9UGQ2 172 aa13.08□□□□□ -0.32
CTSB-223ENST00000532370 CLN5O75503 358 aa13.07□□□□□ -0.32
CTSB-223ENST00000532370 ADAP1O75689 374 aa13.07□□□□□ -0.32
CTSB-223ENST00000532370 IFNA10P01566 189 aa13.07□□□□□ -0.32
CTSB-223ENST00000532370 NPY1RP25929 384 aa13.07□□□□□ -0.32
CTSB-223ENST00000532370 IFITM3Q01628 133 aa13.07□□□□□ -0.32
CTSB-223ENST00000532370 OR10C1Q96KK4 312 aa13.07□□□□□ -0.32
CTSB-223ENST00000532370 TBC1D24Q9ULP9 559 aa13.07□□□□□ -0.32
CTSB-223ENST00000532370 TMED3Q9Y3Q3 217 aa13.07□□□□□ -0.32
CTSB-223ENST00000532370 IGHV3OR16-13A0A075B7E8 117 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 IGHV3-74A0A0B4J1X5 117 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 PIGBOS1A0A0B4J2F0 54 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 MPTX1A8MV57 137 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 A8MZ25 164 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 IAPPP10997 89 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 SLC25A6P12236 298 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 C4orf46Q504U0 113 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 PRSS54Q6PEW0 395 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
CTSB-223ENST00000532370 LYG2Q86SG7 212 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 DEFB125Q8N687 156 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 RNASEH2CQ8TDP1 164 aaKnown RBP13.06□□□□□ -0.32
CTSB-223ENST00000532370 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 TUBA4BQ9H853 241 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 SMPXQ9UHP9 88 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 PUS1Q9Y606 427 aaKnown RBP eCLIP13.06□□□□□ -0.32
CTSB-223ENST00000532370 U3KQ87 197 aa13.06□□□□□ -0.32
CTSB-223ENST00000532370 IGHV7-4-1A0A0J9YVY3 117 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 CHEK1O14757 476 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 IGKV1-17P01599 117 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 RND2P52198 227 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 TIGITQ495A1 244 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 TMEM116Q8NCL8 245 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 RNF2Q99496 336 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 RHPN1-AS1Q9BWJ2 59 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 C20orf85Q9H1P6 137 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 ZFAND3Q9H8U3 227 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 U3KQK5 164 aa13.05□□□□□ -0.32
CTSB-223ENST00000532370 TRAV14DV4A0A0A6YYC5 116 aa13.04□□□□□ -0.32
CTSB-223ENST00000532370 TRAV25A0A0B4J276 109 aa13.04□□□□□ -0.32
CTSB-223ENST00000532370 OR11H12B2RN74 326 aa13.04□□□□□ -0.32
CTSB-223ENST00000532370 APOHP02749 345 aaPredicted RBP13.04□□□□□ -0.32
CTSB-223ENST00000532370 TCRBP04435 133 aa13.04□□□□□ -0.32
CTSB-223ENST00000532370 COQ8AQ8NI60 647 aa13.04□□□□□ -0.32
CTSB-223ENST00000532370 NPIPB3Q92617 1050 aa13.04□□□□□ -0.32
CTSB-223ENST00000532370 TRAV6A0A075B6T7 132 aa13.03□□□□□ -0.32
CTSB-223ENST00000532370 IGHV3-66A0A0C4DH42 116 aa13.03□□□□□ -0.32
CTSB-223ENST00000532370 IFNA4P05014 189 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms