RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 LINC01587Q99440 93 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 KLHDC3Q9BQ90 382 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 TRBV20OR9-2A0A075B6H5 130 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 EGR1P18146 543 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 ASIPP42127 132 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 FAM89BQ8N5H3 189 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 C9JCJ5 164 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 J3QRE1 110 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 PEX7O00628 323 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 COX6CP09669 75 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 FOLR2P14207 255 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
PTPRK-221ENST00000532331 C3orf36Q3SXR2 165 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 ALPK2Q86TB3 2170 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 H7C1H1 209 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 ZNF25P17030 456 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-221ENST00000532331 CMC4P56277 68 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-221ENST00000532331 KIAA1644Q3SXP7 199 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 C18orf12Q96KH6 178 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 SLX1AQ9BQ83 275 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 IGKV1D-13A0A0B4J2D9 117 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 PRR32B1ATL7 298 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 TNFSF13O75888 250 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 IGKV1-13P0DP09 117 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 SPATA45Q537H7 98 aa9.34□□□□□ -0.91
PTPRK-221ENST00000532331 C15orf61A6NNL5 157 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 RBFOX2O43251 390 aaKnown RBP eCLIP9.33□□□□□ -0.921e-6■■■■■ 27.3
PTPRK-221ENST00000532331 FMC1Q96HJ9 113 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 KLK15Q9H2R5 256 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 TRAV14DV4A0A0A6YYC5 116 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 HGFACQ04756 655 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 TMEM144Q7Z5S9 345 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 CIRBPQ14011 172 aaKnown RBP9.33□□□□□ -0.92
PTPRK-221ENST00000532331 TMEM167AQ8TBQ9 72 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 COPS9Q8WXC6 57 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 GEMIN7Q9H840 131 aaKnown RBP9.33□□□□□ -0.92
PTPRK-221ENST00000532331 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 TEX38Q6PEX7 206 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 NR2C2APQ86WQ0 139 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 GAFA1Q96PS6 74 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 MPTX1A8MV57 137 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 K7EM74 188 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 IFITM2Q01629 132 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 OR4D5Q8NGN0 318 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 REG4Q9BYZ8 158 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 FAM215AQ9Y5M1 114 aa9.33□□□□□ -0.92
PTPRK-221ENST00000532331 CD177Q8N6Q3 437 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 SMIM12Q96EX1 92 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 KLF2Q9Y5W3 355 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-221ENST00000532331 IGHV1-3A0A0C4DH29 117 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 ABCA4P78363 2273 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 J3QLI3 93 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 PPP1R17O96001 155 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 KLHL30-AS1Q8NEE0 82 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 M0R381 172 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 LYPD2Q6UXB3 125 aa9.32□□□□□ -0.92
PTPRK-221ENST00000532331 NUP210Q8TEM1 1887 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-221ENST00000532331 TRGV2A0A075B6R0 118 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 A0A087WV48 116 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 ZNF585BQ52M93 769 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 PVRIGQ6DKI7 326 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 ZNF600Q6ZNG1 722 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 ERASQ7Z444 233 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 TNFRSF18Q9Y5U5 241 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
PTPRK-221ENST00000532331 SAA4P35542 130 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 PAX8Q06710 450 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 SCO2A0A1W2PP80 73 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 COL5A1-AS1Q5SY13 56 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 ZNF324BQ6AW86 544 aaPredicted RBP9.31□□□□□ -0.92
PTPRK-221ENST00000532331 Q9H3A6 140 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 ZNF257Q9Y2Q1 563 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 WDR81Q562E7 1941 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 MLNRO43193 412 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 TCF21O43680 179 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 PRSS2P07478 247 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 PAX1P15863 534 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 GATA2P23769 480 aaPredicted RBP9.31□□□□□ -0.92
PTPRK-221ENST00000532331 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 CIARTQ8N365 385 aaPredicted RBP9.31□□□□□ -0.92
PTPRK-221ENST00000532331 PROK2Q9HC23 129 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 HIST1H4GQ99525 98 aa9.31□□□□□ -0.92
PTPRK-221ENST00000532331 H7C2G1 150 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
PTPRK-221ENST00000532331 EFNB1P98172 346 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 MEIG1Q5JSS6 88 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 ARTNQ5T4W7 220 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 C7orf71A4D174 169 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 DUTP33316 252 aaKnown RBP9.3□□□□□ -0.92
PTPRK-221ENST00000532331 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 RNF5Q99942 180 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 RNF222A6NCQ9 220 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 ZNF98A6NK75 572 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 FAM90A9PA6NNJ1 464 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 RAMP3O60896 148 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 NAT1P18440 290 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 PRTN3P24158 256 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms