RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	SLC35E1	Q96K37	410 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	DUX5	Q96PT3	197 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	JMJD8	Q96S16	334 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	RNF2	Q99496	336 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	SSX3	Q99909	188 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	RARRES2	Q99969	163 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	NIPSNAP3B	Q9BS92	247 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	MEGF9	Q9H1U4	602 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	PRDM13	Q9H4Q3	707 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	ESM1	Q9NQ30	184 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	GNG13	Q9P2W3	67 aa		7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	LSM4	Q9Y4Z0	139 aa	Known RBP	7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	TET2	Q6N021	2002 aa	Predicted RBP	7.54	□□□□□ -1.2
NXF1-209	ENST00000531474	ANK3	Q12955	4377 aa	Known RBP	7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	TMEM250	H0YL14	139 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	CORT	O00230	105 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	TSPAN4	O14817	238 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	TIMM23	O14925	209 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	VENTX	O95231	258 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	SNRNP70	P08621	437 aa	Known RBP	7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	OR13C7	P0DN81	318 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	RNASE2	P10153	161 aa	Known RBP	7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	BRS3	P32247	399 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	IER3	P46695	156 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	CDC34	P49427	236 aa	Predicted RBP	7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	RHOB	P62745	196 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	SRSF2	Q01130	221 aa	Known RBP	7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	PNRC1	Q12796	327 aa	Predicted RBP	7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	LY6E	Q16553	131 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	HAGH	Q16775	308 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	ACSM6	Q6P461	480 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	OR5R1	Q8NH85	324 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	RXFP4	Q8TDU9	374 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	RAB24	Q969Q5	203 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	VSIR	Q9H7M9	311 aa		7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	ZNF430	Q9H8G1	570 aa	Predicted RBP	7.53	□□□□□ -1.2
NXF1-209	ENST00000531474	IGHV3-72	A0A0B4J1Y9	119 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474		A0A1B0GV50	99 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474		A0A1W2PPI3	338 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474		M0R036	132 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	SLC25A17	O43808	307 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	CXorf1	O96002	111 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	CRYGB	P07316	175 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	CD24	P25063	80 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	RPL27A	P46776	148 aa	Known RBP	7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	B2M	P61769	119 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	SELENOT	P62341	195 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	CD69	Q07108	199 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	PSG5	Q15238	335 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	ZNF726P1	Q15940	193 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	PRSS8	Q16651	343 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	FAM122C	Q6P4D5	195 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	PPP1R27	Q86WC6	154 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	PRIMA1	Q86XR5	153 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	TMEM86B	Q8N661	226 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	OR1L6	Q8NGR2	347 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	TMEM170A	Q8WVE7	144 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	TVP23C	Q96ET8	276 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	MGST2	Q99735	147 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	GGTLC1	Q9BX51	225 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	RPS10P5	Q9NQ39	176 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	VPREB3	Q9UKI3	123 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	SIGLEC9	Q9Y336	463 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474	PXMP4	Q9Y6I8	212 aa		7.52	□□□□□ -1.21
NXF1-209	ENST00000531474		A0A087WWC5	75 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	ZFP92	A6NM28	416 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	CLDN34	H7C241	214 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	PDE6D	O43924	150 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	CLN5	O75503	358 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	MOS	P00540	346 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	NPBWR1	P48145	328 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	MEF2B	Q02080	365 aa	Predicted RBP	7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	HES1	Q14469	280 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	HABP2	Q14520	560 aa	Predicted RBP	7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	DMRTA1	Q5VZB9	504 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	TMEM219	Q86XT9	240 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	C15orf54	Q8N8G6	183 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	ZNF114	Q8NC26	417 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	PIFO	Q8TCI5	191 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	CFHR4	Q92496	578 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	SLC45A2	Q9UMX9	530 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	NF1	P21359	2839 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	NAV3	Q8IVL0	2385 aa		7.51	□□□□□ -1.21
NXF1-209	ENST00000531474	C7orf77	A4D0Y5	90 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	CXorf65	A6NEN9	183 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474		F6UZH7	168 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474		H3BQ15	152 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	IGKV1D-33	P01593	117 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	IGKV1-33	P01594	117 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	RNASE1	P07998	156 aa	Known RBP	7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	FAM106CP	P0CH98	169 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	STAG3L2	P0CL84	134 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	STAG3L3	P0CL85	134 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	FGF8	P55075	233 aa	Predicted RBP	7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	RIPPLY3	P57055	190 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	TAS2R45	P59539	299 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	PRR20E	P86478	221 aa		7.5	□□□□□ -1.21
NXF1-209	ENST00000531474	PRR20C	P86479	221 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms