RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 S100GP29377 79 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 SDC2P34741 201 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 CBX5P45973 191 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 EIF2B2P49770 351 aaKnown RBP6.62□□□□□ -1.35
NEDD8-206ENST00000531430 HSPE1P61604 102 aaKnown RBP6.62□□□□□ -1.35
NEDD8-206ENST00000531430 TSPAN5P62079 268 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 TBCEQ15813 527 aaPredicted RBP6.62□□□□□ -1.35
NEDD8-206ENST00000531430 IZUMO4Q1ZYL8 232 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 Q6ZRM9 215 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 CSNK1G2-AS1Q8NCQ2 148 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 OR5H2Q8NGV7 314 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 C1QTNF4Q9BXJ3 329 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 ZFAND3Q9H8U3 227 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 TMED3Q9Y3Q3 217 aa6.62□□□□□ -1.35
NEDD8-206ENST00000531430 ANKRD65E5RJM6 399 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 SUB1P53999 127 aaKnown RBP eCLIP6.61□□□□□ -1.356e-8■■■■□ 23
NEDD8-206ENST00000531430 PRCDQ00LT1 54 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 TIGITQ495A1 244 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 DHRS11Q6UWP2 260 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 TBC1D26Q86UD7 250 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 SLC35G3Q8N808 338 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 ATG101Q9BSB4 218 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 ENY2Q9NPA8 101 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
NEDD8-206ENST00000531430 LOC100506127A0A0U1RQW1 187 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 SCGB2A1O75556 95 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 HLA-DMAP28067 261 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 OPRK1P41145 380 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 ETV6P41212 452 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 SNRPD3P62318 126 aaKnown RBP6.6□□□□□ -1.35
NEDD8-206ENST00000531430 TNP2Q05952 138 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 Q6ZR54 194 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 DCANP1Q8TF63 244 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 NRG4Q8WWG1 115 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 MRGPRFQ96AM1 343 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 SLC25A38Q96DW6 304 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 S100A16Q96FQ6 103 aaKnown RBP6.6□□□□□ -1.35
NEDD8-206ENST00000531430 LINC00052Q96N35 136 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 NIPSNAP3BQ9BS92 247 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 PDCD10Q9BUL8 212 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 RNF167Q9H6Y7 350 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 SCRT2Q9NQ03 307 aa6.6□□□□□ -1.35
NEDD8-206ENST00000531430 CLN5O75503 358 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 CRYBB3P26998 211 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 FGF9P31371 208 aaPredicted RBP6.59□□□□□ -1.35
NEDD8-206ENST00000531430 HSPA13P48723 471 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 HOXA1P49639 335 aaPredicted RBP6.59□□□□□ -1.35
NEDD8-206ENST00000531430 AP2S1P53680 142 aaPredicted RBP6.59□□□□□ -1.35
NEDD8-206ENST00000531430 FAM222AQ5U5X8 452 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 LPCAT3Q6P1A2 487 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 ZNF114Q8NC26 417 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 OR4B1Q8NGF8 309 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 Q8WTZ3 238 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 SEC22AQ96IW7 307 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 C7orf50Q9BRJ6 194 aaKnown RBP6.59□□□□□ -1.35
NEDD8-206ENST00000531430 FXYD6Q9H0Q3 95 aa6.59□□□□□ -1.35
NEDD8-206ENST00000531430 MRPL36Q9P0J6 103 aaKnown RBP6.59□□□□□ -1.35
NEDD8-206ENST00000531430 A0A0A6YYH2 397 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 TMEM189A5PLL7 270 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 A6NJ64 397 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 H3BMM0 161 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 IGKV1-39P01597 117 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 CD74P04233 296 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 IGKV1D-39P04432 117 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 HNRNPCP07910 306 aaKnown RBP eCLIP6.58□□□□□ -1.362e-6■□□□□ 8.9
NEDD8-206ENST00000531430 TAS2R46P59540 309 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 TAS2R20P59543 309 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 DEFB1P60022 68 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 RNF212Q495C1 297 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 TMEM88Q6PEY1 159 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 CADM3Q8N126 398 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 RNASE11Q8TAA1 199 aaKnown RBP6.58□□□□□ -1.36
NEDD8-206ENST00000531430 FAM210BQ96KR6 192 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 RFNGQ9Y644 331 aa6.58□□□□□ -1.36
NEDD8-206ENST00000531430 HSPG2P98160 4391 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 TRAV30A0A087WSZ9 112 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 SMIM9A6NGZ8 99 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 FAM90A26D6RGX4 464 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 CORTO00230 105 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 PGAM2P15259 253 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 PRSS3P35030 304 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 HRH1P35367 487 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 AKR1C2P52895 323 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 DAD1P61803 113 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 DHODHQ02127 395 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 KCTD21Q4G0X4 260 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 TMEM69Q5SWH9 247 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 C16orf54Q6UWD8 224 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 GSG1LQ6UXU4 331 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 LYSMD2Q8IV50 215 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 OR4X1Q8NH49 305 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 YTHDF1Q9BYJ9 559 aaKnown RBP6.57□□□□□ -1.36
NEDD8-206ENST00000531430 FNDC4Q9H6D8 234 aaPredicted RBP6.57□□□□□ -1.36
NEDD8-206ENST00000531430 DKK2Q9UBU2 259 aa6.57□□□□□ -1.36
NEDD8-206ENST00000531430 A0A0B4J293 547 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 RPS10-NUDT3A0A1W2PQS6 291 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 CDK2AP2O75956 126 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 NUDT3O95989 172 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 HBE1P02100 147 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 IL4P05112 153 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms