RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 VCX3BQ9H321 246 aa9.56□□□□□ -0.88
HIF3A-214ENST00000531043 HSPG2P98160 4391 aa9.56□□□□□ -0.88
HIF3A-214ENST00000531043 DEFB131BA0A096LNP1 70 aa9.55□□□□□ -0.88
HIF3A-214ENST00000531043 A0A0B4J293 547 aa9.55□□□□□ -0.88
HIF3A-214ENST00000531043 RNASE2P10153 161 aaKnown RBP9.55□□□□□ -0.88
HIF3A-214ENST00000531043 SPP1P10451 314 aa9.55□□□□□ -0.88
HIF3A-214ENST00000531043 NPBWR1P48145 328 aa9.55□□□□□ -0.88
HIF3A-214ENST00000531043 TMEM69Q5SWH9 247 aa9.55□□□□□ -0.88
HIF3A-214ENST00000531043 POM121L12Q8N7R1 296 aa9.55□□□□□ -0.88
HIF3A-214ENST00000531043 S100A16Q96FQ6 103 aaKnown RBP9.55□□□□□ -0.88
HIF3A-214ENST00000531043 TBC1D24Q9ULP9 559 aa9.55□□□□□ -0.88
HIF3A-214ENST00000531043 NACAE9PAV3 2078 aa9.55□□□□□ -0.88
HIF3A-214ENST00000531043 IGKV1-17P01599 117 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 AMBPP02760 352 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 P0C879 139 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 NPPCP23582 126 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 CRYBB3P26998 211 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 RPS19P39019 145 aaKnown RBP9.54□□□□□ -0.88
HIF3A-214ENST00000531043 NEDD8Q15843 81 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 UBE2NLQ5JXB2 153 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 MORN3Q6PF18 240 aaPredicted RBP9.54□□□□□ -0.88
HIF3A-214ENST00000531043 SAMD12Q8N8I0 201 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 GRAMD2BQ96HH9 432 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 RAB40CQ96S21 281 aa9.54□□□□□ -0.88
HIF3A-214ENST00000531043 FAM212BQ9NTI7 297 aaPredicted RBP9.54□□□□□ -0.88
HIF3A-214ENST00000531043 PI3P19957 117 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 PRSS3P35030 304 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 ETV6P41212 452 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 TIGITQ495A1 244 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 ZNF575Q86XF7 245 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 GPX8Q8TED1 209 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 METTL26Q96S19 204 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 TMEM231Q9H6L2 316 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 U3KQE9 123 aa9.53□□□□□ -0.88
HIF3A-214ENST00000531043 IGLV2-18A0A075B6J9 118 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 A0A0G2JRQ6 117 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 A0A1W2PS18 150 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 M0QYG6 137 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 CLN5O75503 358 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 SNCAP37840 140 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 TSPAN5P62079 268 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 TMEM41BQ5BJD5 291 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 PSMG4Q5JS54 123 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 SLC35G3Q8N808 338 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 TP53RKQ96S44 253 aa9.52□□□□□ -0.89
HIF3A-214ENST00000531043 INS-IGF2F8WCM5 200 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 IFNA17P01571 189 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 UCP3P55916 312 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 DEFB1P60022 68 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 LSM3P62310 102 aaKnown RBP9.51□□□□□ -0.89
HIF3A-214ENST00000531043 DHRS2Q13268 280 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 LPCAT3Q6P1A2 487 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 SNX29P2Q8IUI4 249 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 OR4X1Q8NH49 305 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 GLMPQ8WWB7 406 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 TMEM230Q96A57 120 aa9.51□□□□□ -0.89
HIF3A-214ENST00000531043 YTHDF1Q9BYJ9 559 aaKnown RBP9.51□□□□□ -0.89
HIF3A-214ENST00000531043 P0DMU3 169 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 FAM231AP0DMU4 169 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 FAM231CP0DMU5 169 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 S100GP29377 79 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 OPRK1P41145 380 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 SP6Q3SY56 376 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 GSG1LQ6UXU4 331 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 Q6ZRM9 215 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 NDUFAF3Q9BU61 184 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 PLA2G2EQ9NZK7 142 aa9.5□□□□□ -0.89
HIF3A-214ENST00000531043 LRP1BQ9NZR2 4599 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 HELTA6NFD8 242 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 H3BMM0 161 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 TMEM127O75204 238 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 HOXA1P49639 335 aaPredicted RBP9.49□□□□□ -0.89
HIF3A-214ENST00000531043 FXYD7P58549 80 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 RND3P61587 244 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 BSXQ3C1V8 233 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 RNASE12Q5GAN4 147 aaKnown RBP9.49□□□□□ -0.89
HIF3A-214ENST00000531043 C16orf54Q6UWD8 224 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 Q6ZR54 194 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 CENPSQ8N2Z9 138 aa9.49□□□□□ -0.89
HIF3A-214ENST00000531043 FAM90A26D6RGX4 464 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 NXPH3O95157 252 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 CD74P04233 296 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 IGLC1P0CG04 106 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 PGAM2P15259 253 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 RPL5P46777 297 aaKnown RBP9.48□□□□□ -0.89
HIF3A-214ENST00000531043 AKR1C2P52895 323 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 SUB1P53999 127 aaKnown RBP eCLIP9.48□□□□□ -0.89
HIF3A-214ENST00000531043 EMP1P54849 157 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 PIGPP57054 158 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 USF2Q15853 346 aaPredicted RBP9.48□□□□□ -0.89
HIF3A-214ENST00000531043 GDF5OSQ5U4N7 250 aa9.48□□□□□ -0.89
HIF3A-214ENST00000531043 CORTO00230 105 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 HNRNPCP07910 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
HIF3A-214ENST00000531043 RCVRNP35243 200 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 RND2P52198 227 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 DHODHQ02127 395 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 PRSS54Q6PEW0 395 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 LHFPL1Q86WI0 220 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms