RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CDPF1Q6NVV7 123 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 OSTCQ9NRP0 149 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 MSRB2Q9Y3D2 182 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 TRBV9A0A0B4J1U6 114 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 TRAV20A0A0B4J274 112 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 ENSAO43768 121 aaKnown RBP13.85□□□□□ -0.19
BRCA2-204ENST00000530893 UCNP55089 124 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 SUMO1P63165 101 aaKnown RBP13.85□□□□□ -0.19
BRCA2-204ENST00000530893 UBE2L3P68036 154 aaKnown RBP13.85□□□□□ -0.19
BRCA2-204ENST00000530893 PRSS8Q16651 343 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 ZNF841Q6ZN19 808 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 CLEC7AQ9BXN2 247 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 V9GYV3 84 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 IGKV1D-37A0A075B6S9 117 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 IGLC7A0M8Q6 106 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 CORTO00230 105 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 ISLRO14498 428 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 CRYGCP07315 174 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 CRYGBP07316 175 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 LGALS4P56470 323 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 TAS2R60P59551 318 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 PAX2Q02962 417 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 STXBP6Q8NFX7 210 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 OR5AU1Q8NGC0 362 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 C22orf15Q8WYQ4 148 aa13.85□□□□□ -0.19
BRCA2-204ENST00000530893 AMMECR1Q9Y4X0 333 aaPredicted RBP13.85□□□□□ -0.19
BRCA2-204ENST00000530893 PKDREJQ9NTG1 2253 aa13.84□□□□□ -0.19
BRCA2-204ENST00000530893 BUB1B-PAK6H3BSN5 160 aa13.84□□□□□ -0.19
BRCA2-204ENST00000530893 PKIAP61925 76 aa13.84□□□□□ -0.19
BRCA2-204ENST00000530893 GBGT1Q8N5D6 347 aa13.84□□□□□ -0.19
BRCA2-204ENST00000530893 C8orf46Q8TAG6 207 aa13.84□□□□□ -0.19
BRCA2-204ENST00000530893 TPSG1Q9NRR2 321 aa13.84□□□□□ -0.19
BRCA2-204ENST00000530893 INSIG2Q9Y5U4 225 aa13.84□□□□□ -0.19
BRCA2-204ENST00000530893 PIEZO2Q9H5I5 2752 aa13.84□□□□□ -0.19
BRCA2-204ENST00000530893 SMG1Q96Q15 3661 aaKnown RBP13.84□□□□□ -0.19
BRCA2-204ENST00000530893 SLC17A3O00476 420 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 GZMBP10144 247 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 COL8A2P25067 703 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 RPL27AP46776 148 aaKnown RBP13.83□□□□□ -0.2
BRCA2-204ENST00000530893 COMPP49747 757 aaPredicted RBP13.83□□□□□ -0.2
BRCA2-204ENST00000530893 COX19Q49B96 90 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 RITA1Q96K30 269 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 RNF5Q99942 180 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 ZNF355PQ9NSJ1 428 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 CDC42EP3Q9UKI2 254 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 DMXL2Q8TDJ6 3036 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 IGHV1-3A0A0C4DH29 117 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 TSTD3H0UI37 97 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 PLAUP00749 431 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 ZNF672Q499Z4 452 aaPredicted RBP13.83□□□□□ -0.2
BRCA2-204ENST00000530893 LINC01560Q8TB33 94 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 IGF2BP2-AS1Q96M15 143 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 PAXXQ9BUH6 204 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 POLEQ07864 2286 aa13.83□□□□□ -0.2
BRCA2-204ENST00000530893 SSBP2P81877 361 aaPredicted RBP13.82□□□□□ -0.2
BRCA2-204ENST00000530893 PATE2Q6UY27 113 aa13.82□□□□□ -0.2
BRCA2-204ENST00000530893 TMEM116Q8NCL8 245 aa13.82□□□□□ -0.2
BRCA2-204ENST00000530893 TRGV9Q99603 122 aa13.82□□□□□ -0.2
BRCA2-204ENST00000530893 SIGLEC9Q9Y336 463 aa13.82□□□□□ -0.2
BRCA2-204ENST00000530893 PPIAL4CA0A0B4J2A2 164 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 GATCO43716 136 aaKnown RBP13.81□□□□□ -0.2
BRCA2-204ENST00000530893 PPIAL4GP0DN37 164 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 ADMP35318 185 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 OR5I1Q13606 314 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 MORN5Q5VZ52 161 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 ST6GALNAC3Q8NDV1 305 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 PERPQ96FX8 193 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 GNB1LQ9BYB4 327 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 PTPRZ1P23471 2315 aaPredicted RBP13.81□□□□□ -0.2
BRCA2-204ENST00000530893 ADGRG4Q8IZF6 3080 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 IGHV3-72A0A0B4J1Y9 119 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 TRAV5A0A0B4J249 113 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 IGLV2-8P01709 118 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 MT-ND6P03923 174 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 NHLH1Q02575 133 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 TNXAQ16473 311 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 PPP1R27Q86WC6 154 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 TNFRSF19Q9NS68 423 aa13.81□□□□□ -0.2
BRCA2-204ENST00000530893 FAM90A27PA6NNH2 459 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 CX3CL1P78423 397 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 LINC00305Q7Z4B0 112 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 OR8B3Q8NGG8 313 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 OR8B2Q96RD0 313 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 REG1AP05451 166 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 FAM209BQ5JX69 171 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 IBA57Q5T440 356 aaKnown RBP13.8□□□□□ -0.2
BRCA2-204ENST00000530893 WDR73Q6P4I2 378 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 OR1L6Q8NGR2 347 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 RPEQ96AT9 228 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 FXYD5Q96DB9 178 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 MISP3Q96FF7 219 aa13.8□□□□□ -0.2
BRCA2-204ENST00000530893 SRSF8Q9BRL6 282 aaKnown RBP13.8□□□□□ -0.2
BRCA2-204ENST00000530893 MRPL18Q9H0U6 180 aaKnown RBP13.8□□□□□ -0.2
BRCA2-204ENST00000530893 MRPL36Q9P0J6 103 aaKnown RBP13.8□□□□□ -0.2
BRCA2-204ENST00000530893 PTPRQQ9UMZ3 2332 aa13.79□□□□□ -0.2
BRCA2-204ENST00000530893 LYNX1G3V0Z9 82 aa13.79□□□□□ -0.2
BRCA2-204ENST00000530893 CCL21O00585 134 aa13.79□□□□□ -0.2
BRCA2-204ENST00000530893 SIAH2O43255 324 aa13.79□□□□□ -0.2
BRCA2-204ENST00000530893 RD3LP0DJH9 198 aa13.79□□□□□ -0.2
BRCA2-204ENST00000530893 LYNX1P0DP58 116 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms