RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 CCDC59Q9P031 241 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 RSL24D1Q9UHA3 163 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 TRBV6-7A0A0A0MS04 114 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 TRAV10A0A0B4J240 114 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 CGB1A6NKQ9 187 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 TGOLN2O43493 480 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 RGS10O43665 173 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 CREBL2O60519 120 aaPredicted RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 FCGR3AP08637 254 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 RBMY1A1P0DJD3 496 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 RBMY1CP0DJD4 496 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 AKR1D1P51857 326 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 TCTAP57738 103 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 RAB11AP62491 216 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 TMEM187Q14656 261 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 RBMY1FQ15415 496 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 RAB11BQ15907 218 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 RNF212Q495C1 297 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 ACSM3Q53FZ2 586 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 C1orf100Q5SVJ3 147 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 PQLC1Q8N2U9 271 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 NUDT11Q96G61 164 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 OR2A7Q96R45 310 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 GFI1Q99684 422 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 ALKBH7Q9BT30 221 aaPredicted RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 URM1Q9BTM9 101 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 CABLES2Q9BTV7 478 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 OR51E2Q9H255 320 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 DAZ1Q9NQZ3 744 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 SLC2A9Q9NRM0 540 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 CELA1Q9UNI1 258 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 GOLT1BQ9Y3E0 138 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 ALG5Q9Y673 324 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 IGKV1D-8A0A087WSZ0 117 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 TRBV7-1A0A0A6YYK4 115 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 TRAV3A0A0B4J244 114 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 IGHV3-66A0A0C4DH42 116 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 FAM240BA0A1B0GVZ2 78 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 C16orf90A8MZG2 172 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 C11orf94C9JXX5 98 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 MYL12BO14950 172 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 HMGB3O15347 200 aaKnown RBP2.55□□□□□ -2
PTPRC-213ENST00000529828 TNFAIP8O95379 198 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 PPBPP02775 128 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 GNB3P16520 340 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 HLA-GP17693 338 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 SERPINB10P48595 397 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 RBX1P62877 108 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 ST3GAL4Q11206 333 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 TPBGQ13641 420 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 IRF3Q14653 427 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 HSD17B12Q53GQ0 312 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 PVRIGQ6DKI7 326 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 UBE2DNLQ8IWF7 75 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 FAM24BQ8N5W8 94 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 POM121L12Q8N7R1 296 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 STOML3Q8TAV4 291 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 TCTEX1D2Q8WW35 142 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 FCGR1BQ92637 280 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 DAZAP1Q96EP5 407 aaKnown RBP2.55□□□□□ -2
PTPRC-213ENST00000529828 ADTRPQ96IZ2 230 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 FAM210BQ96KR6 192 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 CXorf58Q96LI9 332 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 PFDN5Q99471 154 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 PDCD10Q9BUL8 212 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 ZNF436Q9C0F3 470 aaPredicted RBP2.55□□□□□ -2
PTPRC-213ENST00000529828 GPN1Q9HCN4 374 aaPredicted RBP2.55□□□□□ -2
PTPRC-213ENST00000529828 TAS2R8Q9NYW2 309 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 ELF5Q9UKW6 265 aaPredicted RBP2.55□□□□□ -2
PTPRC-213ENST00000529828 KCNIP3Q9Y2W7 256 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 AK6Q9Y3D8 172 aaKnown RBP2.55□□□□□ -2
PTPRC-213ENST00000529828 TNFRSF18Q9Y5U5 241 aa2.55□□□□□ -2
PTPRC-213ENST00000529828 DEFB131BA0A096LNP1 70 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 IGKV1D-13A0A0B4J2D9 117 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 IGLC7A0M8Q6 106 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 C9orf170A2RU37 121 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 TNFSF12O43508 249 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 YIF1AO95070 293 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 CLEC2LP0C7M8 214 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 IGKV1-13P0DP09 117 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 HIST1H1BP16401 226 aaKnown RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 C4BPBP20851 252 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 NFYAP23511 347 aaPredicted RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 RPL35P42766 123 aaKnown RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 TAS2R43P59537 309 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 DEFB131AP59861 70 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 NUTF2P61970 127 aaKnown RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 RPL8P62917 257 aaKnown RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 BLOC1S1P78537 153 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 ARFRP1Q13795 201 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 OXA1LQ15070 435 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 BSXQ3C1V8 233 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 TOR2AQ5JU69 321 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 NR2C2APQ86WQ0 139 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 H1FOOQ8IZA3 346 aaPredicted RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 PUSL1Q8N0Z8 303 aaKnown RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 ZNF555Q8NEP9 628 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 OR10W1Q8NGF6 305 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 TMEM167AQ8TBQ9 72 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 TMEM203Q969S6 136 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms