RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZNF735P0CB33 412 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 SLC25A4P12235 298 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 NQO2P16083 231 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 F2RP25116 425 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 S100PP25815 95 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 FAUP35544 74 aaKnown RBP6.45□□□□□ -1.38
SSBP3-212ENST00000528930 RPL27AP46776 148 aaKnown RBP6.45□□□□□ -1.38
SSBP3-212ENST00000528930 INSL3P51460 131 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 KLK9Q2XQG4 91 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 ZNF585BQ52M93 769 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 AADACL3Q5VUY0 350 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 ACSM6Q6P461 480 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 C19orf35Q6ZS72 473 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 OR4A5Q8NH83 315 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 CD300LFQ8TDQ1 290 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 USMG5Q96IX5 58 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 C12orf57Q99622 126 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 RSRP1Q9BUV0 290 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 PLEKHA2Q9HB19 425 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 HRASLSQ9HDD0 168 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 SLC2A9Q9NRM0 540 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 MTFP1Q9UDX5 166 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 KLK9Q9UKQ9 250 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 SMAD5-AS1Q9Y6J3 95 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 ANKRD20A5PA0PJZ0 165 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 NPIPB5A8MRT5 1133 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 M0QYG6 137 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 CRYGCP07315 174 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 HLA-GP17693 338 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 LPAR6P43657 344 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 UCP3P55916 312 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 RPL8P62917 257 aaKnown RBP6.44□□□□□ -1.38
SSBP3-212ENST00000528930 OR2F1Q13607 317 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 KLF5Q13887 457 aaPredicted RBP6.44□□□□□ -1.38
SSBP3-212ENST00000528930 RNF212Q495C1 297 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 RNASE12Q5GAN4 147 aaKnown RBP6.44□□□□□ -1.38
SSBP3-212ENST00000528930 DNLZQ5SXM8 178 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 ZNF600Q6ZNG1 722 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 ZNF429Q86V71 674 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 LHFPL1Q86WI0 220 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 CMTM1Q8IZ96 169 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 GLYATL2Q8WU03 294 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 FCAMRQ8WWV6 532 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 TMPRSS5Q9H3S3 457 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 TMEM140Q9NV12 185 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 COMMD9Q9P000 198 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 PEF1Q9UBV8 284 aaKnown RBP6.44□□□□□ -1.38
SSBP3-212ENST00000528930 MLXQ9UH92 298 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 ZNF257Q9Y2Q1 563 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 DMRT1Q9Y5R6 373 aa6.44□□□□□ -1.38
SSBP3-212ENST00000528930 TMEM218A2RU14 115 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 RNF222A6NCQ9 220 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 FAM223BA6NKX1 122 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 MARCH11A6NNE9 402 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 WRBO00258 174 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 SAP30O75446 220 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 OR2J3O76001 311 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 CD74P04233 296 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 CD3DP04234 171 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 AREGP15514 252 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 PSMB6P28072 239 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 ECI1P42126 302 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 OR2B8PP59922 312 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 RHOGP84095 191 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 PHLDA2Q53GA4 152 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 IL34Q6ZMJ4 242 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 TBC1D26Q86UD7 250 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 SLC25A42Q86VD7 318 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 FAM223AQ8IWN6 122 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 KCNRGQ8N5I3 272 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 C12orf45Q8N5I9 185 aaPredicted RBP6.43□□□□□ -1.38
SSBP3-212ENST00000528930 SYT8Q8NBV8 401 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 IL17DQ8TAD2 202 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 NARS2Q96I59 477 aaKnown RBP6.43□□□□□ -1.38
SSBP3-212ENST00000528930 OR51M1Q9H341 326 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 SAV1Q9H4B6 383 aaPredicted RBP6.43□□□□□ -1.38
SSBP3-212ENST00000528930 TUBA4BQ9H853 241 aa6.43□□□□□ -1.38
SSBP3-212ENST00000528930 FAM212BQ9NTI7 297 aaPredicted RBP6.43□□□□□ -1.38
SSBP3-212ENST00000528930 ZNF256Q9Y2P7 627 aaPredicted RBP6.43□□□□□ -1.38
SSBP3-212ENST00000528930 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.42□□□□□ -1.38
SSBP3-212ENST00000528930 TEX50A0A1B0GTY4 177 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 IGLC7A0M8Q6 106 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 NDUFB8O95169 186 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 KRASP01116 189 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 IGKV1-39P01597 117 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 APOC3P02656 99 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 IGKV1D-39P04432 117 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 S100A9P06702 114 aaKnown RBP6.42□□□□□ -1.38
SSBP3-212ENST00000528930 FRMD6-AS1P0C7T7 363 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 G6PCP35575 357 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 CD81P60033 236 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 SRSF3P84103 164 aaKnown RBP6.42□□□□□ -1.38
SSBP3-212ENST00000528930 ATP5G2Q06055 141 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 RNASE10Q5GAN6 216 aaKnown RBP6.42□□□□□ -1.38
SSBP3-212ENST00000528930 ARRDC1Q8N5I2 433 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 TMEM229BQ8NBD8 167 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 NECAP1Q8NC96 275 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 MRGPRFQ96AM1 343 aa6.42□□□□□ -1.38
SSBP3-212ENST00000528930 CXorf58Q96LI9 332 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms