RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 WDR25Q64LD2 544 aaPredicted RBP9.48□□□□□ -0.89
USF1-208ENST00000528768 PNKDQ8N490 385 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 STPG3Q8N7X2 389 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 C22orf15Q8WYQ4 148 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 RPUSD4Q96CM3 377 aaKnown RBP9.48□□□□□ -0.89
USF1-208ENST00000528768 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 UHRF2Q96PU4 802 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 TMPRSS5Q9H3S3 457 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 PATZ1Q9HBE1 687 aaKnown RBP9.48□□□□□ -0.89
USF1-208ENST00000528768 TMEM167BQ9NRX6 74 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 INSIG2Q9Y5U4 225 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 ARL2-SNX15V9GYD0 113 aa9.48□□□□□ -0.89
USF1-208ENST00000528768 PLCE1Q9P212 2302 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 IGHV2-26A0A0B4J1V2 119 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 TCF21O43680 179 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 CEACAM3P40198 252 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 RPS10P46783 165 aaKnown RBP9.47□□□□□ -0.89
USF1-208ENST00000528768 CD69Q07108 199 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 SSX2Q16385 188 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 MOB3BQ86TA1 216 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 Q8N7P7 452 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 TMEM170AQ8WVE7 144 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 SSMEM1Q8WWF3 244 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 RPEQ96AT9 228 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 PARLQ9H300 379 aa9.47□□□□□ -0.89
USF1-208ENST00000528768 TECRQ9NZ01 308 aaKnown RBP9.47□□□□□ -0.89
USF1-208ENST00000528768 PKD1L1Q8TDX9 2849 aa9.46□□□□□ -0.89
USF1-208ENST00000528768 IGHV4-30-2A0A087WSY4 118 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 BUB1B-PAK6H3BSN5 160 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 M0R1W7 72 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 CORTO00230 105 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 FCN3O75636 299 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 AKR1D1P51857 326 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 RND2P52198 227 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 SELENOTP62341 195 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 PRR20EP86478 221 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 PRR20CP86479 221 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 PRR20DP86480 221 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 PRR20BP86481 221 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 PRR20AP86496 221 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 HABP2Q14520 560 aaPredicted RBP9.46□□□□□ -0.9
USF1-208ENST00000528768 ZNF841Q6ZN19 808 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 SLC16A13Q7RTY0 426 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 DTX2Q86UW9 622 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 OR1L4Q8NGR5 311 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 TCEAL7Q9BRU2 100 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 MRPL32Q9BYC8 188 aaKnown RBP9.46□□□□□ -0.9
USF1-208ENST00000528768 CHODLQ9H9P2 273 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 ZNRD1Q9P1U0 126 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 FUT9Q9Y231 359 aa9.46□□□□□ -0.9
USF1-208ENST00000528768 H7BYZ3 331 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 SLC25A17O43808 307 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 IGLV1-47P01700 117 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 GCHFRP30047 84 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 OR10J1P30954 320 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
USF1-208ENST00000528768 BPIFB3P59826 476 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 FAM120AOSQ5T036 256 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 KCNIP4Q6PIL6 250 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 PQLC2Q6ZP29 291 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 ZFP82Q8N141 532 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 OR4P4Q8NGL7 312 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 YPEL4Q96NS1 127 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 PFDN5Q99471 154 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 ZNF430Q9H8G1 570 aaPredicted RBP9.45□□□□□ -0.9
USF1-208ENST00000528768 DOK5Q9P104 306 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 ONECUT1Q9UBC0 465 aa9.45□□□□□ -0.9
USF1-208ENST00000528768 LOC105371242A0A075B767 164 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 LYNX1G3V0Z9 82 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 IGLV2-23P01705 113 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 S100A9P06702 114 aaKnown RBP9.44□□□□□ -0.9
USF1-208ENST00000528768 IGHV4-31P0DP07 118 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 LYNX1P0DP58 116 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 MYOD1P15172 320 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 RPL23P62829 140 aaKnown RBP9.44□□□□□ -0.9
USF1-208ENST00000528768 GAMTQ14353 236 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 ELOBQ15370 118 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 PRSS8Q16651 343 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 C11orf42Q8N5U0 333 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 LY6G5BQ8NDX9 201 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 C2CD4CQ8TF44 421 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 ABHD5Q8WTS1 349 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 FAM168AQ92567 244 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 FAM210BQ96KR6 192 aa9.44□□□□□ -0.9
USF1-208ENST00000528768 SRSF8Q9BRL6 282 aaKnown RBP9.44□□□□□ -0.9
USF1-208ENST00000528768 YLPM1P49750 1951 aaKnown RBP9.44□□□□□ -0.9
USF1-208ENST00000528768 TRBV24-1A0A075B6N3 115 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 IGHV1-3A0A0C4DH29 117 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 AP4M1O00189 453 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 NDUFS7O75251 213 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 S100A8P05109 93 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 LINC00869P0C866 280 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 AREGP15514 252 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 COX7A1P24310 79 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 HTR1DP28221 377 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms