RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 UBE2NLQ5JXB2 153 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 LYPD2Q6UXB3 125 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 ACP7Q6ZNF0 438 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 FA2HQ7L5A8 372 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 ATP5L2Q7Z4Y8 100 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 NPBQ8NG41 125 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 OR52P1PQ8NH57 321 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 CCL4L1Q8NHW4 92 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 THEM6Q8WUY1 208 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 GPR82Q96P67 336 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 VPS25Q9BRG1 176 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 DOHHQ9BU89 302 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 PBDC1Q9BVG4 233 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 TMEM147Q9BVK8 224 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 PBOV1Q9GZY1 135 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 SLC23A2Q9UGH3 650 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 PXMP4Q9Y6I8 212 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 SPTBN4Q9H254 2564 aa3.81□□□□□ -1.8
PCF11-202ENST00000528336 ASCC3Q8N3C0 2202 aaKnown RBP3.8□□□□□ -1.8
PCF11-202ENST00000528336 TET2Q6N021 2002 aaPredicted RBP3.8□□□□□ -1.8
PCF11-202ENST00000528336 IGHV3-74A0A0B4J1X5 117 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 ZNF705GA8MUZ8 300 aaPredicted RBP3.8□□□□□ -1.8
PCF11-202ENST00000528336 AIPO00170 330 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 LGALS9O00182 355 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CYB5BO43169 146 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CHST10O43529 356 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CD5LO43866 347 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 TPST1O60507 370 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 NDUFC2O95298 119 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 FSTL3O95633 263 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CSN2P05814 226 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 MPC1LP0DKB6 136 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CPMP14384 443 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 BLVRBP30043 206 aaPredicted RBP3.8□□□□□ -1.8
PCF11-202ENST00000528336 OR10J1P30954 320 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CD200P41217 278 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 INPP1P49441 399 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 PSMB3P49720 205 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 LHX2P50458 406 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 RAB13P51153 203 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 TNFAIP6P98066 277 aaPredicted RBP3.8□□□□□ -1.8
PCF11-202ENST00000528336 DEFA6Q01524 100 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 OR8B8Q15620 311 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 MPPED2Q15777 294 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.8□□□□□ -1.8
PCF11-202ENST00000528336 NXNL2Q5VZ03 156 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 TCF23Q7RTU1 214 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 LINC00596Q86U02 117 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 ZNF429Q86V71 674 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 MKXQ8IYA7 352 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 ANKRD29Q8N6D5 301 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 YIPF7Q8N8F6 280 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 LINC01555Q8NAE3 123 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 DEFB124Q8NES8 71 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 GPR119Q8TDV5 335 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 NAT14Q8WUY8 206 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 TMEM203Q969S6 136 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 YPEL4Q96NS1 127 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CDC42EP4Q9H3Q1 356 aaKnown RBP3.8□□□□□ -1.8
PCF11-202ENST00000528336 U3KQA8 63 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 DNAH14Q0VDD8 3507 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 CACNA1AO00555 2505 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 LRP4O75096 1905 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 MYLKQ15746 1914 aa3.8□□□□□ -1.8
PCF11-202ENST00000528336 SPTBN2O15020 2390 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 TRAV36DV7A0A075B6V5 113 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 A0A096LPI6 279 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 TMED7-TICAM2A0A0A6YYA0 188 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 SPAARA0A1B0GVQ0 90 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 C9orf170A2RU37 121 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 COX7A2P2O60397 106 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 PIAS1O75925 651 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 APOMO95445 188 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 IFNA10P01566 189 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 DBIP07108 87 aaKnown RBP3.79□□□□□ -1.8
PCF11-202ENST00000528336 C8GP07360 202 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 SOD3P08294 240 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 ORM2P19652 201 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 MDKP21741 143 aaPredicted RBP3.79□□□□□ -1.8
PCF11-202ENST00000528336 G6PCP35575 357 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 LOXL1Q08397 574 aaPredicted RBP3.79□□□□□ -1.8
PCF11-202ENST00000528336 ENDOGQ14249 297 aaKnown RBP3.79□□□□□ -1.8
PCF11-202ENST00000528336 GUSBP11Q6P575 273 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 MDP1Q86V88 176 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 SGPP2Q8IWX5 399 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 CTAGE3PQ8IX95 158 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 ZNF555Q8NEP9 628 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 OR1L1Q8NH94 360 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 PATE1Q8WXA2 126 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 OR5P3Q8WZ94 311 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 MALSU1Q96EH3 234 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 ZNF436Q9C0F3 470 aaPredicted RBP3.79□□□□□ -1.8
PCF11-202ENST00000528336 POPDC3Q9HBV1 291 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 DHCR7Q9UBM7 475 aaKnown RBP3.79□□□□□ -1.8
PCF11-202ENST00000528336 ANAPC10Q9UM13 185 aa3.79□□□□□ -1.8
PCF11-202ENST00000528336 GOLGA4Q13439 2230 aaKnown RBP3.79□□□□□ -1.8
PCF11-202ENST00000528336 COL5A1P20908 1838 aaPredicted RBP3.79□□□□□ -1.8
PCF11-202ENST00000528336 NCOR2Q9Y618 2525 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 PLXNB3Q9ULL4 1909 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms