RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TGOLN2O43493 480 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 FGL1Q08830 312 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 TMEM187Q14656 261 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 ZFP69Q49AA0 526 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
CAPN1-212ENST00000527887 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 LGI3Q8N145 548 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 GLYATL2Q8WU03 294 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 HYLS1Q96M11 299 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 TMEM222Q9H0R3 208 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 MLXQ9UH92 298 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 TMEM56-RWDD3S4R434 201 aa10.66□□□□□ -0.7
CAPN1-212ENST00000527887 TENM2Q9NT68 2774 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.7
CAPN1-212ENST00000527887 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.7
CAPN1-212ENST00000527887 CDS2O95674 445 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 IFNA21P01568 189 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.7
CAPN1-212ENST00000527887 RPA2P15927 270 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 UCP1P25874 307 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 G6PCP35575 357 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 H2BFSP57053 126 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 TM4SF20Q53R12 229 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 UNQ9165/PRO28630Q6UXU0 137 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 TBC1D26Q86UD7 250 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 CACNG8Q8WXS5 425 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 TMEM190Q8WZ59 177 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 TMEM14BQ9NUH8 114 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 C21orf62Q9NYP8 219 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 TMED3Q9Y3Q3 217 aa10.65□□□□□ -0.7
CAPN1-212ENST00000527887 LCE6AA0A183 80 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 K7EMT4 169 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 NDUFA4O00483 81 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 EDN2P20800 178 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 PHLDA2Q53GA4 152 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 ZFAND6Q6FIF0 208 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 LAMTOR1Q6IAA8 161 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 BTNL8Q6UX41 500 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 GSG1LQ6UXU4 331 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 NOXA1Q86UR1 476 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 OR1P1Q8NH06 330 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-212ENST00000527887 HINT2Q9BX68 163 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 NMES1Q9C002 83 aa10.64□□□□□ -0.71
CAPN1-212ENST00000527887 DAZ1Q9NQZ3 744 aaKnown RBP10.64□□□□□ -0.71
CAPN1-212ENST00000527887 STARD9Q9P2P6 4700 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 SACSQ9NZJ4 4579 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 LOC102724200A0A096LPH7 203 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-212ENST00000527887 C15orf61A6NNL5 157 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 GOSR2O14653 212 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 SCAF4O95104 1147 aaKnown RBP10.63□□□□□ -0.71
CAPN1-212ENST00000527887 OR5AC1P0C628 307 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 SLC25A6P12236 298 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 CD300CQ08708 224 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 OR2C3Q8N628 320 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 OR4A16Q8NH70 328 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 SCARB1Q8WTV0 552 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 C2orf50Q96LR7 162 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 TXN2Q99757 166 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 GGTLC1Q9BX51 225 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 NSG2Q9Y328 171 aa10.63□□□□□ -0.71
CAPN1-212ENST00000527887 OR2T8A6NH00 312 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 BOLA2-SMG1P6H3BVE0 249 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 K7EIM0 57 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 TSPAN4O14817 238 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 ATG12O94817 140 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 FCGR2BP31994 310 aaPredicted RBP10.62□□□□□ -0.71
CAPN1-212ENST00000527887 EIF2B2P49770 351 aaKnown RBP10.62□□□□□ -0.71
CAPN1-212ENST00000527887 RELQ04864 619 aaPredicted RBP10.62□□□□□ -0.71
CAPN1-212ENST00000527887 H2BFWTQ7Z2G1 175 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 OR2T35Q8NGX2 323 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 RBPMSQ93062 196 aaKnown RBP10.62□□□□□ -0.71
CAPN1-212ENST00000527887 SEC22AQ96IW7 307 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 TP53RKQ96S44 253 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 FAM110AQ9BQ89 295 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 WFDC10AQ9H1F0 79 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 RYR2Q92736 4967 aa10.62□□□□□ -0.71
CAPN1-212ENST00000527887 IGHV3-35A0A0C4DH35 117 aa10.61□□□□□ -0.71
CAPN1-212ENST00000527887 HMSDA8MTL9 139 aa10.61□□□□□ -0.71
CAPN1-212ENST00000527887 MFAP2P55001 183 aa10.61□□□□□ -0.71
CAPN1-212ENST00000527887 HSPE1P61604 102 aaKnown RBP10.61□□□□□ -0.71
CAPN1-212ENST00000527887 ERHP84090 104 aaKnown RBP10.61□□□□□ -0.71
CAPN1-212ENST00000527887 PRCDQ00LT1 54 aa10.61□□□□□ -0.71
CAPN1-212ENST00000527887 IL15RAQ13261 267 aa10.61□□□□□ -0.71
CAPN1-212ENST00000527887 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
CAPN1-212ENST00000527887 PDCD10Q9BUL8 212 aa10.61□□□□□ -0.71
CAPN1-212ENST00000527887 F8W735 103 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-212ENST00000527887 NUPL2O15504 423 aaKnown RBP10.6□□□□□ -0.71
CAPN1-212ENST00000527887 SLC25A4P12235 298 aa10.6□□□□□ -0.71
CAPN1-212ENST00000527887 MFAP4P55083 255 aa10.6□□□□□ -0.71
CAPN1-212ENST00000527887 CMC4P56277 68 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-212ENST00000527887 Q56UQ5 140 aa10.6□□□□□ -0.71
CAPN1-212ENST00000527887 FAM219AQ8IW50 185 aa10.6□□□□□ -0.71
CAPN1-212ENST00000527887 CHRDL1Q9BU40 450 aa10.6□□□□□ -0.71
CAPN1-212ENST00000527887 RETNQ9HD89 108 aa10.6□□□□□ -0.71
CAPN1-212ENST00000527887 C5orf51A6NDU8 294 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 OR4C46A6NHA9 309 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 INS-IGF2F8WCM5 200 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 UBE2CO00762 179 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms