RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CHRNB4P30926 498 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 HNRNPA3P51991 378 aaKnown RBP10.23□□□□□ -0.77
CAPN1-208ENST00000527323 TAS2R45P59539 299 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 CT45A1Q5HYN5 189 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 OR10J3Q5JRS4 329 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 ASPHD1Q5U4P2 390 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 MOGAT3Q86VF5 341 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 CT45A3Q8NHU0 189 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 SNRNP40Q96DI7 357 aaKnown RBP10.23□□□□□ -0.77
CAPN1-208ENST00000527323 SSBP3Q9BWW4 388 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-208ENST00000527323 SLC25A10Q9UBX3 287 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-208ENST00000527323 UQCR10Q9UDW1 63 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 FOXA2Q9Y261 457 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-208ENST00000527323 CHD6Q8TD26 2715 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 DPRXA6NFQ7 191 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 ZNF324O75467 553 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-208ENST00000527323 AMY1AP04745 511 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 USF1P22415 310 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-208ENST00000527323 COX19Q49B96 90 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 FAM201AQ5SY85 155 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 VHLLQ6RSH7 139 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 TMEM14BQ9NUH8 114 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 IDI2-AS1Q9NZ38 188 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 USP9XQ93008 2570 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-208ENST00000527323 C3orf79P0CE67 100 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 TMEM11P17152 192 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 TET2Q6N021 2002 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-208ENST00000527323 Q8NA96 180 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 NEUROG1Q92886 237 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 SLC35E1Q96K37 410 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 CDC42EP3Q9UKI2 254 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 CBY1Q9Y3M2 126 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 VPS13CQ709C8 3753 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 IGHV2OR16-5A0A0B4J2B6 119 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 SRRM5B3KS81 715 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 BMPR1BO00238 502 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 F2RL2O00254 374 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 ISLRO14498 428 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 SPRY3O43610 288 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 HLA-DQA1P01909 254 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 LINC00614P0C842 121 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 SFTPCP11686 197 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 GCSAMQ8N6F7 178 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 DEFB108BQ8NET1 73 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 DDB2Q92466 427 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 POLQO75417 2590 aa10.22□□□□□ -0.77
CAPN1-208ENST00000527323 GGTLC3B5MD39 225 aa10.21□□□□□ -0.77
CAPN1-208ENST00000527323 K7ENP7 123 aa10.21□□□□□ -0.77
CAPN1-208ENST00000527323 KIR2DL2P43627 348 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-208ENST00000527323 SEM1Q6ZVN7 128 aa10.21□□□□□ -0.77
CAPN1-208ENST00000527323 Q8N976 141 aa10.21□□□□□ -0.77
CAPN1-208ENST00000527323 OR2V2Q96R30 315 aa10.21□□□□□ -0.77
CAPN1-208ENST00000527323 DNAJC4Q9NNZ3 241 aa10.21□□□□□ -0.77
CAPN1-208ENST00000527323 CLCF1Q9UBD9 225 aa10.21□□□□□ -0.77
CAPN1-208ENST00000527323 TNCP24821 2201 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 PRRX1P54821 245 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 C22orf34Q6ZV56 151 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 OR9G1Q8NH87 305 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 ZNF503Q96F45 646 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 LINC00479Q96M42 142 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 PPP1R14DQ9NXH3 145 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 DKK4Q9UBT3 224 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 PRNDQ9UKY0 176 aa10.21□□□□□ -0.78
CAPN1-208ENST00000527323 TSKUQ8WUA8 353 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 ZFP30Q9Y2G7 519 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 IGKV1OR2-108A0A075B7D4 117 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 TRAV5A0A0B4J249 113 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 IGHV1-18A0A0C4DH31 117 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 HYPMO75409 117 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 CRYABP02511 175 aaKnown RBP10.2□□□□□ -0.78
CAPN1-208ENST00000527323 C8orf88P0DMB2 117 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 SPRNQ5BIV9 151 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 IGFL2Q6UWQ7 119 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 Q6ZS92 163 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 KLHDC1Q8N7A1 406 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 STPG4Q8N801 248 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 ZNF439Q8NDP4 499 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 FAM168AQ92567 244 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 LAMTOR2Q9Y2Q5 125 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 HSBP1O75506 76 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 CEACAM4O75871 244 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 IGLC2P0DOY2 106 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 IGLC3P0DOY3 106 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 PPOXP50336 477 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 MFAP2P55001 183 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 UBE2L3P68036 154 aaKnown RBP10.2□□□□□ -0.78
CAPN1-208ENST00000527323 LCN12Q6JVE5 192 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 PRR27Q6MZM9 219 aa10.2□□□□□ -0.78
CAPN1-208ENST00000527323 IZUMO1RA6ND01 250 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 C17orf58Q2M2W7 97 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 MBNL2Q5VZF2 373 aaKnown RBP10.19□□□□□ -0.78
CAPN1-208ENST00000527323 STUMQ69YW2 141 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 ZNF355PQ9NSJ1 428 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 ARL2-SNX15V9GYD0 113 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 CTRLP40313 264 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 RELQ04864 619 aaPredicted RBP10.19□□□□□ -0.78
CAPN1-208ENST00000527323 NIT1Q86X76 327 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 ADTRPQ96IZ2 230 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 RAB9BQ9NP90 201 aa10.19□□□□□ -0.78
CAPN1-208ENST00000527323 CELSR1Q9NYQ6 3014 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms