RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 PPIFP30405 207 aaKnown RBP7.86□□□□□ -1.15
CTNND1-213ENST00000526357 FOXL1Q12952 345 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 C1QL2Q7Z5L3 287 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 ECM29Q5VYK3 1845 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 C1QTNF9P0C862 333 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 MRPS18CQ9Y3D5 142 aaKnown RBP7.85□□□□□ -1.15
CTNND1-213ENST00000526357 TRBV6-7A0A0A0MS04 114 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 CDKN1AP38936 164 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 RSPO4Q2I0M5 234 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-213ENST00000526357 C6orf226Q5I0X4 101 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 SIGLEC12Q96PQ1 595 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 GZMBP10144 247 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 GGTLC1Q9BX51 225 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 A8MXK9 166 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 PRCDQ00LT1 54 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 SS18Q15532 418 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 TNFRSF14Q92956 283 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 TRAV41A0A0B4J266 112 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 MYMXA0A1B0GTQ4 84 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 PYYP10082 97 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 PSG7Q13046 419 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 ZNF876PQ49A33 203 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 MORN2Q502X0 79 aa7.85□□□□□ -1.15
CTNND1-213ENST00000526357 CHCHD2Q9Y6H1 151 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-213ENST00000526357 MYO5AQ9Y4I1 1855 aaKnown RBP7.84□□□□□ -1.15
CTNND1-213ENST00000526357 TRAV8-1A0A0A6YYK1 113 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 CT83Q5H943 113 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 GTF3AQ92664 365 aaKnown RBP7.84□□□□□ -1.15
CTNND1-213ENST00000526357 DLX4Q92988 240 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-213ENST00000526357 REPIN1Q9BWE0 567 aaKnown RBP7.84□□□□□ -1.15
CTNND1-213ENST00000526357 SPANXA1Q9NS26 97 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 RFPL3SP0C7P2 107 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 MESP2Q0VG99 397 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 WFDC6Q9BQY6 131 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 GLI3P10071 1580 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 CSRP2Q16527 193 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 PLPPR1Q8TBJ4 325 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 COL18A1P39060 1754 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 VCYO14598 125 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 RASL11AQ6T310 242 aa7.84□□□□□ -1.15
CTNND1-213ENST00000526357 SLC25A48Q6ZT89 311 aaKnown RBP7.84□□□□□ -1.15
CTNND1-213ENST00000526357 COLQQ9Y215 455 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-213ENST00000526357 TNRC6CQ9HCJ0 1690 aaKnown RBP7.84□□□□□ -1.15
CTNND1-213ENST00000526357 CCL3L1P16619 93 aa7.84□□□□□ -1.16
CTNND1-213ENST00000526357 CD33P20138 364 aa7.84□□□□□ -1.16
CTNND1-213ENST00000526357 FAM90A2PQ658T7 463 aa7.84□□□□□ -1.16
CTNND1-213ENST00000526357 ZNF497Q6ZNH5 498 aa7.84□□□□□ -1.16
CTNND1-213ENST00000526357 WFDC12Q8WWY7 111 aa7.84□□□□□ -1.16
CTNND1-213ENST00000526357 COX11Q9Y6N1 276 aa7.84□□□□□ -1.16
CTNND1-213ENST00000526357 GAGE2AQ6NT46 116 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 ZNFX1Q9P2E3 1918 aaKnown RBP7.83□□□□□ -1.16
CTNND1-213ENST00000526357 TRGV1A0A0A0MS02 117 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 CELA3AP09093 270 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 LAMB2P55268 1798 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 SRD5A1P18405 259 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 DEFB121Q5J5C9 76 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 OCC1Q8TAD7 63 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 IMMP1LQ96LU5 166 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 C4orf51C9J302 202 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 EFNB3Q15768 340 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 ZXDCQ2QGD7 858 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-213ENST00000526357 KLF17Q5JT82 389 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-213ENST00000526357 SUMO4Q6EEV6 95 aa7.83□□□□□ -1.16
CTNND1-213ENST00000526357 LSM4Q9Y4Z0 139 aaKnown RBP7.83□□□□□ -1.16
CTNND1-213ENST00000526357 BCL6BQ8N143 479 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-213ENST00000526357 C1QTNF4Q9BXJ3 329 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 SNHG12Q9BXW3 62 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 SLC25A39Q9BZJ4 359 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-213ENST00000526357 ABCA3Q99758 1704 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 IGHV3-73A0A0B4J1V6 119 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 ZNF883P0CG24 379 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 LURAP1LQ8IV03 231 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 TRAV8-3A0A0A6YYJ7 113 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 H3BMM0 161 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 TNFSF13O75888 250 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 ESDP10768 282 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 C1QL4Q86Z23 238 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 MBNL3Q9NUK0 354 aaKnown RBP7.82□□□□□ -1.16
CTNND1-213ENST00000526357 NPIPB5A8MRT5 1133 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 SLC25A28Q96A46 364 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 SDK1Q7Z5N4 2213 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 IGFBP3P17936 291 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-213ENST00000526357 LHFPL4Q7Z7J7 247 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 BCORQ6W2J9 1755 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 NUP205Q92621 2012 aa7.82□□□□□ -1.16
CTNND1-213ENST00000526357 IGKV2-40A0A087WW87 121 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-213ENST00000526357 RNF222A6NCQ9 220 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 TIMM23O14925 209 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 IGKV2D-40P01614 121 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-213ENST00000526357 TEX38Q6PEX7 206 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 SPSB3Q6PJ21 355 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 URB1O60287 2271 aaKnown RBP7.81□□□□□ -1.16
CTNND1-213ENST00000526357 MYH14Q7Z406 1995 aaKnown RBP7.81□□□□□ -1.16
CTNND1-213ENST00000526357 D6R8Y8 96 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 OR10W1Q8NGF6 305 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 CEACAM1P13688 526 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 KIAA1551Q9HCM1 1747 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 ZNF831Q5JPB2 1677 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms