RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 MYO10Q9HD67 2058 aa2.81□□□□□ -1.96
USP47-206ENST00000525367 ARID1AO14497 2285 aa2.81□□□□□ -1.96
USP47-206ENST00000525367 HECW1Q76N89 1606 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 LTBP4Q8N2S1 1624 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 CPDO75976 1380 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 BORCS7-ASMTA0A0B4J1R7 106 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 BCL2P10415 239 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 ZNF14P17017 642 aaPredicted RBP2.8□□□□□ -1.96
USP47-206ENST00000525367 RPL28P46779 137 aaKnown RBP2.8□□□□□ -1.96
USP47-206ENST00000525367 SRP9P49458 86 aaKnown RBP2.8□□□□□ -1.96
USP47-206ENST00000525367 RTL8BQ17RB0 113 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 CCDC153Q494R4 210 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 BRMS1LQ5PSV4 323 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 Q6ZS52 159 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 MSRB3Q8IXL7 192 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 ZNF561Q8N587 486 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 OR52R1Q8NGF1 315 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 OR51T1Q8NGJ9 327 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 GPX7Q96SL4 187 aaPredicted RBP2.8□□□□□ -1.96
USP47-206ENST00000525367 TMEM133Q9H2Q1 129 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 MRPL16Q9NX20 251 aaKnown RBP2.8□□□□□ -1.96
USP47-206ENST00000525367 RASL12Q9NYN1 266 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 DOCK3Q8IZD9 2030 aa2.8□□□□□ -1.96
USP47-206ENST00000525367 TLCD2A6NGC4 264 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 TMEM212A6NML5 194 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 J3KT08 172 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 GNRH2O43555 120 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 TCL1BO95988 128 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 TRGC2P03986 189 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 DBIP07108 87 aaKnown RBP2.79□□□□□ -1.96
USP47-206ENST00000525367 EVX1P49640 407 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 POLR2HP52434 150 aaKnown RBP2.79□□□□□ -1.96
USP47-206ENST00000525367 PLCXD2Q0VAA5 305 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 LYZL1Q6UWQ5 148 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 DPPA3Q6W0C5 159 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 DYNAPQ8N1N2 210 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 RPP25LQ8N5L8 163 aaKnown RBP2.79□□□□□ -1.96
USP47-206ENST00000525367 OR4D11Q8NGI4 311 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 TMEM106AQ96A25 262 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 TSC22D3Q99576 134 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 HIST1H2BLQ99880 126 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 MINOS1-NBL1R4GNA1 71 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 HSPE1-MOB4S4R3N1 261 aa2.79□□□□□ -1.96
USP47-206ENST00000525367 RALGAPA2Q2PPJ7 1873 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
USP47-206ENST00000525367 RPL7P18124 248 aaKnown RBP2.78□□□□□ -1.96
USP47-206ENST00000525367 UBE2BP63146 152 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 MOBPQ13875 183 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 KISS1Q15726 138 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 DEFB115Q30KQ5 88 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 PYDC2Q56P42 97 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 AGTRAPQ6RW13 159 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 SLC35E3Q7Z769 313 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 OR5A1Q8NGJ0 315 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 STAG3L4Q8TBR4 150 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 BORCS8Q96FH0 119 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 TEX37Q96LM6 180 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 YIPF3Q9GZM5 350 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 TMEM126AQ9H061 195 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 CYTL1Q9NRR1 136 aa2.78□□□□□ -1.96
USP47-206ENST00000525367 KIF1BO60333 1816 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 TRAV7A0A075B6U4 112 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 TRGV10A0A0A0MS01 117 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 A0A0D9SEW6 157 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 A0A0D9SG52 128 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 A0A1B0GX51 115 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 LRCOL1A6NCL2 159 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 H7C2G1 150 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 M0R378 163 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 PRB2P02812 416 aaPredicted RBP2.77□□□□□ -1.97
USP47-206ENST00000525367 S100A11P31949 105 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 CKS1BP61024 79 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 LY6EQ16553 131 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 DEFB134Q4QY38 66 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 KHDC3LQ587J8 217 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 PABPC1L2AQ5JQF8 200 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 C1orf140Q5VVS0 124 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 SIGLECL1Q8N7X8 197 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 CMTM2Q8TAZ6 248 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 WFDC5Q8TCV5 224 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 SLC25A21Q9BQT8 299 aaPredicted RBP2.77□□□□□ -1.97
USP47-206ENST00000525367 EPDR1Q9UM22 224 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 MED31Q9Y3C7 131 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 ZCCHC11Q5TAX3 1644 aaKnown RBP2.77□□□□□ -1.97
USP47-206ENST00000525367 SCN10AQ9Y5Y9 1956 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 COL27A1Q8IZC6 1860 aaPredicted RBP2.77□□□□□ -1.97
USP47-206ENST00000525367 NOTCH2Q04721 2471 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 ADGRL1O94910 1474 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 ATG2BQ96BY7 2078 aa2.77□□□□□ -1.97
USP47-206ENST00000525367 DSCAMO60469 2012 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 THADAQ6YHU6 1953 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 TRAV36DV7A0A075B6V5 113 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 A0A087WX48 190 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 A0A0J9YX75 114 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 TRDV1A0A1B0GX56 115 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 EFCAB10A6NFE3 127 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 OR2T1O43869 369 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 HRES1P13985 223 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms