RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 MRPL36Q9P0J6 103 aaKnown RBP17.34■□□□□ 0.37
USP47-205ENST00000525257 X6R8D5 127 aa17.34■□□□□ 0.37
USP47-205ENST00000525257 P2RY1P47900 373 aa17.33■□□□□ 0.36
USP47-205ENST00000525257 UCP3P55916 312 aa17.33■□□□□ 0.36
USP47-205ENST00000525257 LSM3P62310 102 aaKnown RBP17.33■□□□□ 0.36
USP47-205ENST00000525257 GRAMD2BQ96HH9 432 aa17.33■□□□□ 0.36
USP47-205ENST00000525257 METTL26Q96S19 204 aa17.33■□□□□ 0.36
USP47-205ENST00000525257 IFNA17P01571 189 aa17.32■□□□□ 0.36
USP47-205ENST00000525257 IGKV1-5P01602 117 aa17.32■□□□□ 0.36
USP47-205ENST00000525257 RNASE2P10153 161 aaKnown RBP17.32■□□□□ 0.36
USP47-205ENST00000525257 ACTL10Q5JWF8 245 aa17.32■□□□□ 0.36
USP47-205ENST00000525257 LINC00336Q6ZUF6 198 aa17.32■□□□□ 0.36
USP47-205ENST00000525257 A0A0B4J293 547 aa17.31■□□□□ 0.36
USP47-205ENST00000525257 CRYBB3P26998 211 aa17.31■□□□□ 0.36
USP47-205ENST00000525257 AKR1C2P52895 323 aa17.31■□□□□ 0.36
USP47-205ENST00000525257 PVRIGQ6DKI7 326 aa17.31■□□□□ 0.36
USP47-205ENST00000525257 SNX29P2Q8IUI4 249 aa17.31■□□□□ 0.36
USP47-205ENST00000525257 FNDC4Q9H6D8 234 aaPredicted RBP17.31■□□□□ 0.36
USP47-205ENST00000525257 TBC1D24Q9ULP9 559 aa17.31■□□□□ 0.36
USP47-205ENST00000525257 CELA1Q9UNI1 258 aa17.31■□□□□ 0.36
USP47-205ENST00000525257 INS-IGF2F8WCM5 200 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 M0QYG6 137 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 CORTO00230 105 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 CLN5O75503 358 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 ATP6V1G2O95670 118 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 PI3P19957 117 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 RCVRNP35243 200 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 OPRK1P41145 380 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 HOXA1P49639 335 aaPredicted RBP17.3■□□□□ 0.36
USP47-205ENST00000525257 SUB1P53999 127 aaKnown RBP eCLIP17.3■□□□□ 0.36
USP47-205ENST00000525257 ZNF767PQ75MW2 155 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 DCANP1Q8TF63 244 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 TMEM230Q96A57 120 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 PDCD10Q9BUL8 212 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 RNF126Q9BV68 326 aa17.3■□□□□ 0.36
USP47-205ENST00000525257 DYNC1H1Q14204 4646 aaKnown RBP17.3■□□□□ 0.36
USP47-205ENST00000525257 P0C879 139 aa17.29■□□□□ 0.36
USP47-205ENST00000525257 PGAM2P15259 253 aa17.29■□□□□ 0.36
USP47-205ENST00000525257 ETV6P41212 452 aa17.29■□□□□ 0.36
USP47-205ENST00000525257 MLANAQ16655 118 aa17.29■□□□□ 0.36
USP47-205ENST00000525257 CSNK1G2-AS1Q8NCQ2 148 aa17.29■□□□□ 0.36
USP47-205ENST00000525257 NARS2Q96I59 477 aaKnown RBP17.29■□□□□ 0.36
USP47-205ENST00000525257 TP53RKQ96S44 253 aa17.29■□□□□ 0.36
USP47-205ENST00000525257 SCPEP1Q9HB40 452 aa17.29■□□□□ 0.36
USP47-205ENST00000525257 COMMD3Q9UBI1 195 aa17.29■□□□□ 0.36
USP47-205ENST00000525257 DNAH11Q96DT5 4516 aa17.28■□□□□ 0.36
USP47-205ENST00000525257 A0A1B0GVY2 172 aa17.28■□□□□ 0.36
USP47-205ENST00000525257 TIGITQ495A1 244 aa17.28■□□□□ 0.36
USP47-205ENST00000525257 OR4X1Q8NH49 305 aa17.28■□□□□ 0.36
USP47-205ENST00000525257 PKD1P98161 4303 aa17.28■□□□□ 0.36
USP47-205ENST00000525257 SMIM31A0A1B0GVY4 71 aa17.27■□□□□ 0.36
USP47-205ENST00000525257 AMBPP02760 352 aa17.27■□□□□ 0.36
USP47-205ENST00000525257 RND3P61587 244 aa17.27■□□□□ 0.36
USP47-205ENST00000525257 DHRS2Q13268 280 aa17.27■□□□□ 0.36
USP47-205ENST00000525257 ENY2Q9NPA8 101 aa17.27■□□□□ 0.36
USP47-205ENST00000525257 DEFB131BA0A096LNP1 70 aa17.26■□□□□ 0.35
USP47-205ENST00000525257 SCGB2A1O75556 95 aa17.26■□□□□ 0.35
USP47-205ENST00000525257 IGKV1-17P01599 117 aa17.26■□□□□ 0.35
USP47-205ENST00000525257 PIGPP57054 158 aa17.26■□□□□ 0.35
USP47-205ENST00000525257 C12orf74Q32Q52 190 aa17.26■□□□□ 0.35
USP47-205ENST00000525257 KCTD21Q4G0X4 260 aa17.26■□□□□ 0.35
USP47-205ENST00000525257 PSMG4Q5JS54 123 aa17.26■□□□□ 0.35
USP47-205ENST00000525257 APOA1P02647 267 aa17.25■□□□□ 0.35
USP47-205ENST00000525257 RNASE12Q5GAN4 147 aaKnown RBP17.25■□□□□ 0.35
USP47-205ENST00000525257 YIPF6Q96EC8 236 aa17.25■□□□□ 0.35
USP47-205ENST00000525257 ZNF486Q96H40 463 aaPredicted RBP17.25■□□□□ 0.35
USP47-205ENST00000525257 RAB40CQ96S21 281 aa17.25■□□□□ 0.35
USP47-205ENST00000525257 C3orf85A0A1B0GTC6 90 aa17.24■□□□□ 0.35
USP47-205ENST00000525257 HELTA6NFD8 242 aa17.24■□□□□ 0.35
USP47-205ENST00000525257 ATG12O94817 140 aa17.24■□□□□ 0.35
USP47-205ENST00000525257 RPL5P46777 297 aaKnown RBP17.24■□□□□ 0.35
USP47-205ENST00000525257 EIF2B2P49770 351 aaKnown RBP17.24■□□□□ 0.35
USP47-205ENST00000525257 TRIM16LQ309B1 348 aa17.24■□□□□ 0.35
USP47-205ENST00000525257 SCRT1Q9BWW7 348 aa17.24■□□□□ 0.35
USP47-205ENST00000525257 A0A0G2JRQ6 117 aa17.23■□□□□ 0.35
USP47-205ENST00000525257 M0R2N4 97 aa17.23■□□□□ 0.35
USP47-205ENST00000525257 P0DMU3 169 aa17.23■□□□□ 0.35
USP47-205ENST00000525257 FAM231AP0DMU4 169 aa17.23■□□□□ 0.35
USP47-205ENST00000525257 FAM231CP0DMU5 169 aa17.23■□□□□ 0.35
USP47-205ENST00000525257 SP6Q3SY56 376 aa17.23■□□□□ 0.35
USP47-205ENST00000525257 POM121L12Q8N7R1 296 aa17.23■□□□□ 0.35
USP47-205ENST00000525257 U3KQE9 123 aa17.23■□□□□ 0.35
USP47-205ENST00000525257 PRSS29PA6NIE9 313 aa17.22■□□□□ 0.35
USP47-205ENST00000525257 ELK1P19419 428 aa17.22■□□□□ 0.35
USP47-205ENST00000525257 BSXQ3C1V8 233 aa17.22■□□□□ 0.35
USP47-205ENST00000525257 C16orf54Q6UWD8 224 aa17.22■□□□□ 0.35
USP47-205ENST00000525257 LHFPL1Q86WI0 220 aa17.22■□□□□ 0.35
USP47-205ENST00000525257 RNASE11Q8TAA1 199 aaKnown RBP17.22■□□□□ 0.35
USP47-205ENST00000525257 GLMPQ8WWB7 406 aa17.22■□□□□ 0.35
USP47-205ENST00000525257 RRNAD1Q96FB5 475 aaKnown RBP17.22■□□□□ 0.35
USP47-205ENST00000525257 NDUFAF3Q9BU61 184 aa17.22■□□□□ 0.35
USP47-205ENST00000525257 XCL2Q9UBD3 114 aa17.22■□□□□ 0.35
USP47-205ENST00000525257 TRAV30A0A087WSZ9 112 aa17.21■□□□□ 0.35
USP47-205ENST00000525257 RTL8CO15255 209 aa17.21■□□□□ 0.35
USP47-205ENST00000525257 HPGDSO60760 199 aa17.21■□□□□ 0.35
USP47-205ENST00000525257 HNRNPCP07910 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
USP47-205ENST00000525257 MED14OSP0DP75 135 aa17.21■□□□□ 0.35
USP47-205ENST00000525257 RNASE10Q5GAN6 216 aaKnown RBP17.21■□□□□ 0.35
USP47-205ENST00000525257 RPS10-NUDT3A0A1W2PQS6 291 aa17.2■□□□□ 0.34
USP47-205ENST00000525257 IGLC1P0CG04 106 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms