RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 GRPRP30550 384 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 PYCR1P32322 319 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 S100A5P33763 92 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 ZNF83P51522 516 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 PSMD7P51665 324 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 OR2B6P58173 313 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 H3F3AP84243 136 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 FOXF1Q12946 379 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 BCL2A1Q16548 175 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 MOGQ16653 247 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 TMEM241Q24JQ0 296 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 LINC00303Q3SY05 128 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 HBMQ6B0K9 141 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 RPL22L1Q6P5R6 122 aaKnown RBP1.98□□□□□ -2.09
SKP1-212ENST00000523966 CD200R1LQ6Q8B3 271 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 GAPTQ8N292 157 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 LINC00337Q8N6G1 96 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 ATP6V1C2Q8NEY4 427 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 OR8S1Q8NH09 359 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 PSMF1Q92530 271 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 AP3S1Q92572 193 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 SLC25A44Q96H78 314 aaPredicted RBP1.98□□□□□ -2.09
SKP1-212ENST00000523966 ARL5BQ96KC2 179 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 Q96M85 177 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 KCTD7Q96MP8 289 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 NMNAT3Q96T66 252 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 MED18Q9BUE0 208 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 MROQ9BYG7 248 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 SLC25A31Q9H0C2 315 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 RAB1BQ9H0U4 201 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 DCSTAMPQ9H295 470 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 ASCL3Q9NQ33 180 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 NDUFB11Q9NX14 153 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 CLEC2DQ9UHP7 191 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 ZNF230Q9UIE0 474 aaPredicted RBP1.98□□□□□ -2.09
SKP1-212ENST00000523966 LSM2Q9Y333 95 aaKnown RBP1.98□□□□□ -2.09
SKP1-212ENST00000523966 RBMX2Q9Y388 322 aaKnown RBP1.98□□□□□ -2.09
SKP1-212ENST00000523966 SPTBN1Q01082 2364 aaKnown RBP1.98□□□□□ -2.09
SKP1-212ENST00000523966 ZGRF1Q86YA3 2104 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 WDFY4Q6ZS81 3184 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 TRAV1-2A0A0B4J238 106 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 A0A1B0GW15 77 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 A0A1W2PNN7 141 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 PGPA6NDG6 321 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 METTL15A6NJ78 407 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 CLDN25C9JDP6 229 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 LRRN3E7EW58 273 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 H3BQ85 93 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 C15orf65H3BRN8 121 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 J3QLW9 94 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 PDCD5O14737 125 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 APOC1P02654 83 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 GYPBP06028 91 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 CD2P06729 351 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 ALOX5APP20292 161 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 GADD45AP24522 165 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 TGFBR2P37173 567 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 CBX5P45973 191 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 PCBD1P61457 104 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 VBP1P61758 197 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 NCS1P62166 190 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 LSM6P62312 80 aaKnown RBP1.97□□□□□ -2.09
SKP1-212ENST00000523966 PLGLB1Q02325 96 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 CEACAM16Q2WEN9 425 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 Q3ZCU0 254 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 Q499Y3 187 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 MESTQ5EB52 335 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 PDZD11Q5EBL8 140 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 LINC01590Q5TEZ4 76 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 AMMECR1LQ6DCA0 310 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 CLEC18BQ6UXF7 455 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 DPPA2Q7Z7J5 298 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 LRP11Q86VZ4 500 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 OR6V1Q8N148 313 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 OR2V1Q8NHB1 315 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 OTOSQ8NHW6 89 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 MCFD2Q8NI22 146 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 DYNC2LI1Q8TCX1 351 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 THEM6Q8WUY1 208 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 ACOT12Q8WYK0 555 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 BORCS5Q969J3 196 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 ITFG2Q969R8 447 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 TMEM203Q969S6 136 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 SMIM19Q96E16 107 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 ZMYND19Q96E35 227 aaPredicted RBP1.97□□□□□ -2.09
SKP1-212ENST00000523966 FMC1Q96HJ9 113 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 CEP19Q96LK0 163 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 TSPAN32Q96QS1 320 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 DCUN1D5Q9BTE7 237 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 PROK2Q9HC23 129 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 EMC3Q9P0I2 261 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 CKLFQ9UBR5 152 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 NAGKQ9UJ70 344 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 GNG8Q9UK08 70 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 POLR1DQ9Y2S0 133 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 FREM1Q5H8C1 2179 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 TLN1Q9Y490 2541 aaKnown RBP1.97□□□□□ -2.09
SKP1-212ENST00000523966 FRYLO94915 3013 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 MYO7BQ6PIF6 2116 aa1.97□□□□□ -2.09
SKP1-212ENST00000523966 DIDO1Q9BTC0 2240 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms