RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 F2RL2O00254 374 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 SPATA31B1PQ5VZV4 182 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 TMEM92Q6UXU6 159 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 TEX45Q8NA69 505 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF837Q96EG3 531 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-213ENST00000523488 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF318Q5VUA4 2279 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 TEX50A0A1B0GTY4 177 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 PCBD1P61457 104 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 LTC4SQ16873 150 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 PRAMEF5Q5TYX0 476 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 PRAMEF6Q5VXH4 476 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 GCSAMQ8N6F7 178 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 TPRX1Q8N7U7 411 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 HINT2Q9BX68 163 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 XIRP2A4UGR9 3374 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 A0A1W2PRE2 83 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 C5orf49A4QMS7 147 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 CHEK1O14757 476 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 ADTRPQ96IZ2 230 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 UCN2Q96RP3 112 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 MLST8Q9BVC4 326 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 MS4A5Q9H3V2 200 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 PROK2Q9HC23 129 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 ENY2Q9NPA8 101 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 A1L4Q6 167 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 SHISA9B4DS77 424 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 SYNGR1O43759 233 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 FOXH1O75593 365 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 B3GALT5-AS1P59052 145 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF146Q15072 292 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 PSMG4Q5JS54 123 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 FAM222BQ8WU58 562 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF492Q9P255 531 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 U3KQK5 164 aa6.87□□□□□ -1.31
CSMD1-213ENST00000523488 CRYGCP07315 174 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 HSD17B10Q99714 261 aaKnown RBP6.86□□□□□ -1.31
CSMD1-213ENST00000523488 PHF7Q9BWX1 381 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-213ENST00000523488 LINC00470Q9BZP3 86 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 ZMAT4Q9H898 229 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 FGF21Q9NSA1 209 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 PRO0461Q9UI25 63 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 IGHV1-24A0A0C4DH33 117 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 SPTY2D1-AS1A0A0U1RR47 76 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF716A6NP11 495 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 C17orf98A8MV24 154 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 LAMTOR5O43504 91 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 P04436 131 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 EFNB3Q15768 340 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 POU2AF1Q16633 256 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF766Q5HY98 468 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 WIPI1Q5MNZ9 446 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-213ENST00000523488 SAMD5Q5TGI4 173 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 FAM90A1Q86YD7 464 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 COL25A1Q9BXS0 654 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-213ENST00000523488 FSCN3Q9NQT6 498 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 DLL3Q9NYJ7 618 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 A0A1B0GWB2 263 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 A0A1W2PPM0 123 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 C19orf71A6NCJ1 209 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF137PP52743 207 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 ATP5IP56385 69 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-213ENST00000523488 TAS2R45P59539 299 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 AAED1Q7RTV5 226 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 BLNKQ8WV28 456 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 MRAP2Q96G30 205 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 IDI2-AS1Q9NZ38 188 aa6.86□□□□□ -1.31
CSMD1-213ENST00000523488 CHCHD2Q9Y6H1 151 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-213ENST00000523488 HEATR1Q9H583 2144 aaKnown RBP6.86□□□□□ -1.31
CSMD1-213ENST00000523488 CHD7Q9P2D1 2997 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 CUL9Q8IWT3 2517 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 SMIM13P0DJ93 91 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 ERVK-16P61578 105 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 NUP35Q8NFH5 326 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 OR2H1Q9GZK4 316 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 IGKV3D-15A0A087WSY6 115 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 ANKRD30BLA7E2S9 258 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 HIGD1CA8MV81 97 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 ZNHIT1O43257 154 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 IGHV4-34P06331 123 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 CT45A10P0DMU9 189 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 TM4SF20Q53R12 229 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 MIR17HGQ75NE6 70 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 TMEM116Q8NCL8 245 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 PRR7Q8TB68 274 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 A0A1B0GX78 115 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 OR11H12B2RN74 326 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 SRSF1Q07955 248 aaKnown RBP eCLIP6.85□□□□□ -1.31
CSMD1-213ENST00000523488 FOXE3Q13461 319 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 GUSBP1Q15486 140 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 TIMM23BQ5SRD1 257 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 ABHD12Q8N2K0 398 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 OR11H1Q8NG94 326 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 OR11H2Q8NH07 326 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 DDB2Q92466 427 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 FAM168AQ92567 244 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms