RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 S4R3C0 116 aa9.24□□□□□ -0.93
PVT1-215ENST00000522963 CORTO00230 105 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 CST7O76096 145 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 IGHV3-11P01762 117 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 IGHV3-48P01763 117 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 IGHV3-23P01764 117 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 OPRK1P41145 380 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 EWSR1Q01844 656 aaKnown RBP eCLIP9.23□□□□□ -0.93
PVT1-215ENST00000522963 CD69Q07108 199 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 EXOSC2Q13868 293 aaKnown RBP9.23□□□□□ -0.93
PVT1-215ENST00000522963 OR8G2PQ6IF36 304 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 KLHL30-AS1Q8NEE0 82 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 OR11H4Q8NGC9 324 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 SCARB1Q8WTV0 552 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 BSCL2Q96G97 398 aaPredicted RBP9.23□□□□□ -0.93
PVT1-215ENST00000522963 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
PVT1-215ENST00000522963 A0A0G2JLM5 398 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 RPL12P30050 165 aaKnown RBP9.22□□□□□ -0.93
PVT1-215ENST00000522963 SULT1A1P50225 295 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 NHLH2Q02577 135 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 C8orf86Q6ZUL3 223 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 SLC16A13Q7RTY0 426 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 ZNF546Q86UE3 836 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 C1QL4Q86Z23 238 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 VN1R17PQ8TDU5 208 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 CXorf58Q96LI9 332 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 UBE2E2Q96LR5 201 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 OR5B12Q96R08 314 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 SLC25A31Q9H0C2 315 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 C21orf62Q9NYP8 219 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 MRPL36Q9P0J6 103 aaKnown RBP9.22□□□□□ -0.93
PVT1-215ENST00000522963 TNFSF18Q9UNG2 199 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 NBEAL1Q6ZS30 2694 aa9.22□□□□□ -0.93
PVT1-215ENST00000522963 RPS10-NUDT3A0A1W2PQS6 291 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 F8W735 103 aaPredicted RBP9.21□□□□□ -0.94
PVT1-215ENST00000522963 GPX4P36969 197 aaPredicted RBP9.21□□□□□ -0.94
PVT1-215ENST00000522963 CDX1P47902 265 aaPredicted RBP9.21□□□□□ -0.94
PVT1-215ENST00000522963 ZNF343Q6P1L6 599 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 ACOT7LQ6ZUV0 252 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 STX12Q86Y82 276 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 TMEM217Q8N7C4 229 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 OR10P1Q8NGE3 313 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 ZNF502Q8TBZ5 544 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 EEF1AKMT3Q96AZ1 226 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 CCDC140Q96MF4 163 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 AQP10Q96PS8 301 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 DUX3Q96PT4 197 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 HSPB11Q9Y547 144 aa9.21□□□□□ -0.94
PVT1-215ENST00000522963 TRBV7-1A0A0A6YYK4 115 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 RNF222A6NCQ9 220 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 C1QBP02746 253 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 LGALS1P09382 135 aaKnown RBP9.2□□□□□ -0.94
PVT1-215ENST00000522963 CD33P20138 364 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 MFAP4P55083 255 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 DLK1P80370 383 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 BAXQ07812 192 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 SLC38A11Q08AI6 406 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 GAMTQ14353 236 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 DEFB136Q30KP8 78 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 ETFRF1Q6IPR1 90 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 ACSM6Q6P461 480 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 CACNG8Q8WXS5 425 aa9.2□□□□□ -0.94
PVT1-215ENST00000522963 TRRAPQ9Y4A5 3859 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.19□□□□□ -0.94
PVT1-215ENST00000522963 ANKRD34BA5PLL1 514 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 HMSDA8MTL9 139 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 I3L521 148 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 ARPC5O15511 151 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 PFDN1O60925 122 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 SCAF4O95104 1147 aaKnown RBP9.19□□□□□ -0.94
PVT1-215ENST00000522963 TRBV12-3P01733 135 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 CLEC3BP05452 202 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 S100A11P31949 105 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 FCGR2BP31994 310 aaPredicted RBP9.19□□□□□ -0.94
PVT1-215ENST00000522963 GPR183P32249 361 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 NUP62P37198 522 aaPredicted RBP9.19□□□□□ -0.94
PVT1-215ENST00000522963 RND2P52198 227 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 HBG1P69891 147 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 HBG2P69892 147 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 Q56UQ5 140 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 CLEC19AQ6UXS0 136 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 UBAC2Q8NBM4 344 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 INO80EQ8NBZ0 244 aaPredicted RBP9.19□□□□□ -0.94
PVT1-215ENST00000522963 TMEM116Q8NCL8 245 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 OR1S2Q8NGQ3 325 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 OR5C1Q8NGR4 320 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 OR4X1Q8NH49 305 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 C4orf3Q8WVX3 66 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 NPIPB3Q92617 1050 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 ACY3Q96HD9 319 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 SLC35E1Q96K37 410 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 GGACTQ9BVM4 153 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 ZC4H2Q9NQZ6 224 aa9.19□□□□□ -0.94
PVT1-215ENST00000522963 SMCO3A2RU48 225 aa9.18□□□□□ -0.94
PVT1-215ENST00000522963 OR2T8A6NH00 312 aa9.18□□□□□ -0.94
PVT1-215ENST00000522963 NPBWR1P48145 328 aa9.18□□□□□ -0.94
PVT1-215ENST00000522963 AP2S1P53680 142 aaPredicted RBP9.18□□□□□ -0.94
PVT1-215ENST00000522963 RUNX1Q01196 453 aa9.18□□□□□ -0.94
PVT1-215ENST00000522963 CLINT1Q14677 625 aa9.18□□□□□ -0.94
PVT1-215ENST00000522963 LILRB2Q8N423 598 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms