RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
CTNNA1-236ENST00000522792 LYPD6BQ8NI32 183 aa12.18□□□□□ -0.46
CTNNA1-236ENST00000522792 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
CTNNA1-236ENST00000522792 RCC1LQ96I51 464 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-236ENST00000522792 CREBBPQ92793 2442 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 AKAP9Q99996 3911 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 NPIPB5A8MRT5 1133 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 I3L521 148 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 YIF1AO95070 293 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 CRYGCP07315 174 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 M6PRP20645 277 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 GATA2P23769 480 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 ETFRF1Q6IPR1 90 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 FAM122CQ6P4D5 195 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 STPG3Q8N7X2 389 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
CTNNA1-236ENST00000522792 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 B2MP61769 119 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 CCL20P78556 96 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 SRSF3P84103 164 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 SPSB3Q6PJ21 355 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 UNQ5815/PRO19632Q6UWF5 114 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 LCN15Q6UWW0 184 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 IL34Q6ZMJ4 242 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 TTC9CQ8N5M4 171 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 BPIFCQ8NFQ6 507 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 PITPNC1Q9UKF7 332 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 I3L2K1 104 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 MBP02144 154 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 FGF8P55075 233 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 DEFA5Q01523 94 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 ACOT6Q3I5F7 207 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 SPNS3Q6ZMD2 512 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 ZNF48Q96MX3 618 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 SLC45A2Q9UMX9 530 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 S4R3C0 116 aa12.16□□□□□ -0.46
CTNNA1-236ENST00000522792 ZFP92A6NM28 416 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 G3V318 75 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 IER3P46695 156 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 C9orf139Q6ZV77 190 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 FANCD2OSQ96PS1 177 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 GSX1Q9H4S2 264 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 KCNIP2Q9NS61 270 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 SLC39A9Q9NUM3 307 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
CTNNA1-236ENST00000522792 IGKV1D-37A0A075B6S9 117 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 K7EIM0 57 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 RPL29P47914 159 aaKnown RBP12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 PRR20EP86478 221 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 PRR20CP86479 221 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 PRR20DP86480 221 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 PRR20BP86481 221 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 PRR20AP86496 221 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 KRTAP1-1Q07627 177 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 OR1L6Q8NGR2 347 aa12.15□□□□□ -0.47
CTNNA1-236ENST00000522792 TEX15Q9BXT5 2789 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 IGLV11-55A0A075B6I3 123 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 RAB19A4D1S5 217 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 MAP1LC3B2A6NCE7 125 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 NUDT19A8MXV4 375 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 LINC00869P0C866 280 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 BLCAPP62952 87 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 ZNF90Q03938 601 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 TOR2AQ5JU69 321 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 EIF4E3Q8N5X7 224 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 THAP8Q8NA92 274 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 ACTR3CQ9C0K3 210 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 MAP1LC3BQ9GZQ8 125 aa12.14□□□□□ -0.47
CTNNA1-236ENST00000522792 OR2J3O76001 311 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 FAM110DQ8TAY7 271 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 TCRBV4S1A1TA0A5B7 111 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 CYB5BO43169 146 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 HBE1P02100 147 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 CDC34P49427 236 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 Q6YL49 198 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 Q6ZS46 218 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 NARS2Q96I59 477 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 TREM1Q9NP99 234 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 YAE1D1Q9NRH1 226 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 FLNAP21333 2647 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-236ENST00000522792 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
CTNNA1-236ENST00000522792 BTBD17A6NE02 478 aa12.12□□□□□ -0.47
CTNNA1-236ENST00000522792 M0QZK8 103 aa12.12□□□□□ -0.47
CTNNA1-236ENST00000522792 CD5LO43866 347 aa12.12□□□□□ -0.47
CTNNA1-236ENST00000522792 SOX15O60248 233 aa12.12□□□□□ -0.47
CTNNA1-236ENST00000522792 NDUFB8O95169 186 aa12.12□□□□□ -0.47
CTNNA1-236ENST00000522792 C16orf82Q7Z2V1 217 aa12.12□□□□□ -0.47
CTNNA1-236ENST00000522792 A0A1W2PPV4 95 aa12.11□□□□□ -0.47
CTNNA1-236ENST00000522792 HOXA3O43365 443 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-236ENST00000522792 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
CTNNA1-236ENST00000522792 LINC00052Q96N35 136 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms