RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ABCA4P78363 2273 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 PPP1R17O96001 155 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 TNFRSF14Q92956 283 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 ST20Q9HBF5 79 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 LY6G6EA0A0G2JKS1 128 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 TMEM262E9PQX1 116 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 C18orf12Q96KH6 178 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 ZNF319Q9P2F9 582 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 FBXL7Q9UJT9 491 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 U3KQA8 63 aa13.5□□□□□ -0.25
USP42-207ENST00000521713 HEATR5BQ9P2D3 2071 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 C17orf98A8MV24 154 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 SRRM5B3KS81 715 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 TSPAN13O95857 204 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 CA1P00915 261 aaPredicted RBP13.49□□□□□ -0.25
USP42-207ENST00000521713 B3GALT5-AS1P59052 145 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 FAM53AQ6NSI3 398 aaPredicted RBP13.49□□□□□ -0.25
USP42-207ENST00000521713 DUX5Q96PT3 197 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 GNB1LQ9BYB4 327 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 METRNQ9UJH8 293 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 A0A1B0GUT8 65 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 MBD3L1Q8WWY6 194 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 IFI27L2Q9H2X8 130 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 PROB1E7EW31 1015 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 NUP37Q8NFH4 326 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 OSTCQ9NRP0 149 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 LYNX1G3V0Z9 82 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 AMBPP02760 352 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 SNRPCP09234 159 aaKnown RBP13.49□□□□□ -0.25
USP42-207ENST00000521713 LYNX1P0DP58 116 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 EGR1P18146 543 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 DLX6P56179 175 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 ZNF497Q6ZNH5 498 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 C21orf62Q9NYP8 219 aa13.49□□□□□ -0.25
USP42-207ENST00000521713 J3QRE1 110 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 CCL20P78556 96 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 PRELID3AQ96N28 172 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 PRSS22Q9GZN4 317 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 NBR2O15453 112 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 FAM89BQ8N5H3 189 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 RPP21Q9H633 154 aaKnown RBP13.48□□□□□ -0.25
USP42-207ENST00000521713 MED12Q93074 2177 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 TRAV1-1A0A0B4J248 108 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 APOHP02749 345 aaPredicted RBP13.48□□□□□ -0.25
USP42-207ENST00000521713 IGFL3Q6UXB1 125 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 FMC1Q96HJ9 113 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 ADMP35318 185 aa13.48□□□□□ -0.25
USP42-207ENST00000521713 H0YIZ8 118 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 PEX7O00628 323 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 FOXA3P55318 350 aaPredicted RBP13.47□□□□□ -0.25
USP42-207ENST00000521713 MS4A6AQ9H2W1 248 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 H3BUT2 72 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 CACNG8Q8WXS5 425 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 NUDT11Q96G61 164 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 PRSS2P07478 247 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 CX3CL1P78423 397 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 TMEM190Q8WZ59 177 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 MYO7BQ6PIF6 2116 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 PRR32B1ATL7 298 aa13.47□□□□□ -0.25
USP42-207ENST00000521713 POLEQ07864 2286 aa13.46□□□□□ -0.25
USP42-207ENST00000521713 TRAV24A0A0B4J272 114 aa13.46□□□□□ -0.25
USP42-207ENST00000521713 MORN2Q502X0 79 aa13.46□□□□□ -0.25
USP42-207ENST00000521713 RNASEH2CQ8TDP1 164 aaKnown RBP13.46□□□□□ -0.25
USP42-207ENST00000521713 KIR2DL4Q99706 377 aa13.46□□□□□ -0.25
USP42-207ENST00000521713 KIF26BQ2KJY2 2108 aa13.46□□□□□ -0.25
USP42-207ENST00000521713 RRHO14718 337 aa13.46□□□□□ -0.25
USP42-207ENST00000521713 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
USP42-207ENST00000521713 PRSS33Q8NF86 280 aa13.46□□□□□ -0.25
USP42-207ENST00000521713 PIP4P1Q86T03 277 aa13.46□□□□□ -0.26
USP42-207ENST00000521713 OR2K2Q8NGT1 345 aa13.46□□□□□ -0.26
USP42-207ENST00000521713 PHLDA3Q9Y5J5 127 aa13.46□□□□□ -0.26
USP42-207ENST00000521713 MDC1Q14676 2089 aaKnown RBP13.45□□□□□ -0.26
USP42-207ENST00000521713 TRAV8-6A0A0B4J262 113 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 IGHV3-35A0A0C4DH35 117 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 ATP5G3P48201 142 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 COLCA1Q6ZS62 124 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 ORAOV1Q8WV07 137 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 CHCHD1Q96BP2 118 aaKnown RBP13.45□□□□□ -0.26
USP42-207ENST00000521713 SNRNP200O75643 2136 aaKnown RBP13.45□□□□□ -0.26
USP42-207ENST00000521713 PGPEP1LA6NFU8 196 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 SLC25A28Q96A46 364 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 SAA2-SAA4A0A096LPE2 208 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
USP42-207ENST00000521713 GOLT1AQ6ZVE7 132 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 DTX1Q86Y01 620 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 TRBV20OR9-2A0A075B6H5 130 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 CGB1A6NKQ9 187 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 MEGF9Q9H1U4 602 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
USP42-207ENST00000521713 CGAP01215 116 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 IGHV3-48P01763 117 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 CIARTQ8N365 385 aaPredicted RBP13.44□□□□□ -0.26
USP42-207ENST00000521713 FAM19A2Q8N3H0 131 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 IGHV3OR16-12A0A075B7B8 117 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 HSD52Q0P140 79 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 FOXL1Q12952 345 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 PYY3Q5JQD4 70 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms