RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 V9GY05 133 aa4.25□□□□□ -1.73
PABPC1-216ENST00000520868 IGLV11-55A0A075B6I3 123 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 IGLV7-46A0A075B6I9 117 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 TRBV7-1A0A0A6YYK4 115 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 IGKV1D-13A0A0B4J2D9 117 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 PGPEP1LA6NFU8 196 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 MFNGO00587 321 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 KBTBD11O94819 623 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 DIRAS3O95661 229 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 HLA-DQB1P01920 261 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 IGKV1-13P0DP09 117 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 HIST1H1BP16401 226 aaKnown RBP4.24□□□□□ -1.73
PABPC1-216ENST00000520868 HIST1H1DP16402 221 aaKnown RBP4.24□□□□□ -1.73
PABPC1-216ENST00000520868 CD36P16671 472 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 CTRB1P17538 263 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 FCGR2BP31994 310 aaPredicted RBP4.24□□□□□ -1.73
PABPC1-216ENST00000520868 OR10A3P58181 314 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 RPL8P62917 257 aaKnown RBP4.24□□□□□ -1.73
PABPC1-216ENST00000520868 CDNFQ49AH0 187 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 CTRB2Q6GPI1 263 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 LAMTOR1Q6IAA8 161 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 PUSL1Q8N0Z8 303 aaKnown RBP4.24□□□□□ -1.73
PABPC1-216ENST00000520868 VSTM2AQ8TAG5 236 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 TCTEX1D2Q8WW35 142 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 MARC2Q969Z3 335 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 CXorf58Q96LI9 332 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 SPAG8Q99932 426 aaPredicted RBP4.24□□□□□ -1.73
PABPC1-216ENST00000520868 VGLL1Q99990 258 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 C5orf66Q9H5L9 145 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 SCN3BQ9NY72 215 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 TAS2R8Q9NYW2 309 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 UFC1Q9Y3C8 167 aa4.24□□□□□ -1.73
PABPC1-216ENST00000520868 IGHV3OR16-8A0A075B7F1 116 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 IGHV3-21A0A0B4J1V1 117 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 TRAV3A0A0B4J244 114 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 KIR2DL5BA0A0G2JN68 375 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 KIR2DL5BA0A0G2JPC4 375 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 METTL21EPA6NDL7 271 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 TGOLN2O43493 480 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 TNFSF12O43508 249 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 ZNF207O43670 478 aaKnown RBP4.23□□□□□ -1.73
PABPC1-216ENST00000520868 SLC22A5O76082 557 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 S1PR2O95136 353 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 HRASP01112 189 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 IFNA4P05014 189 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 CTSDP07339 412 aaPredicted RBP4.23□□□□□ -1.73
PABPC1-216ENST00000520868 CTXN2P0C2S0 81 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 HLA-GP17693 338 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 GALP22466 123 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 MAS1LP35410 378 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 RANBP1P43487 201 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 TFPI2P48307 235 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 FABP5Q01469 135 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 IRF3Q14653 427 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 TRAM1Q15629 374 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 SLC25A24Q6NUK1 477 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 Q6ZS49 121 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 APRG1Q8IVJ8 170 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 KIR2DL5AQ8N109 375 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 OR4S2Q8NH73 311 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 KIR2DL5BQ8NHK3 375 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 C11orf45Q8TAV5 145 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 ZNF502Q8TBZ5 544 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 GATAD1Q8WUU5 269 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 GALNT14Q96FL9 552 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 HSD17B10Q99714 261 aaKnown RBP4.23□□□□□ -1.73
PABPC1-216ENST00000520868 RARRES2Q99969 163 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 SRSF8Q9BRL6 282 aaKnown RBP4.23□□□□□ -1.73
PABPC1-216ENST00000520868 CENPOQ9BU64 300 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 C20orf24Q9BUV8 137 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 CCDC90BQ9GZT6 254 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 ATG5Q9H1Y0 275 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 HRH4Q9H3N8 390 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 HRASLSQ9HDD0 168 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 C8orf4Q9NR00 106 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 CCL28Q9NRJ3 127 aa4.23□□□□□ -1.73
PABPC1-216ENST00000520868 PKD1P98161 4303 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 IGKV3-7A0A075B6H7 116 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 SMIM30A4D0T7 59 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 OR2T8A6NH00 312 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 OR4C46A6NHA9 309 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 PDCD5O14737 125 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 DEFB4AO15263 64 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 DTYMKP23919 212 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 PSMA1P25786 263 aaKnown RBP4.22□□□□□ -1.73
PABPC1-216ENST00000520868 PTBP1P26599 531 aaKnown RBP eCLIP4.22□□□□□ -1.736e-18■□□□□ 8
PABPC1-216ENST00000520868 OR2B8PP59922 312 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 PNRC1Q12796 327 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-216ENST00000520868 MLLT11Q13015 90 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-216ENST00000520868 EIF4EBP1Q13541 118 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-216ENST00000520868 RCN1Q15293 331 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 KLK9Q2XQG4 91 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 OGFRL1Q5TC84 451 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-216ENST00000520868 CNIH2Q6PI25 160 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 SPAG16Q8N0X2 631 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 UBAC2Q8NBM4 344 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 OR10W1Q8NGF6 305 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 CD300LFQ8TDQ1 290 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 MGLLQ99685 303 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 CHRDL1Q9BU40 450 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms