RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 RNASE10Q5GAN6 216 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 FAAP20Q6NZ36 180 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 NOXA1Q86UR1 476 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 GVQW1Q8N7I0 195 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 BEST4Q8NFU0 473 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 DYNLRB2Q8TF09 96 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 FYTTD1Q96QD9 318 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 C12orf57Q99622 126 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 KRTAP17-1Q9BYP8 105 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 HIPK2Q9H2X6 1198 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 PLEKHA3Q9HB20 300 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 SEPSECSQ9HD40 501 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 SLC2A8Q9NY64 477 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 BET1LQ9NYM9 111 aa6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 TECRQ9NZ01 308 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-221ENST00000520339 IGLV11-55A0A075B6I3 123 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 A0A0B4J293 547 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 TMEM213A2RRL7 107 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 RBFOX2O43251 390 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 TNFSF12O43508 249 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 NDUFB6O95139 128 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 PPYP01298 95 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 IGHV3-23P01764 117 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 CBLN1P23435 193 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 S100PP25815 95 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 HRH1P35367 487 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 MEOX2P50222 304 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 OR2B8PP59922 312 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 CD81P60033 236 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 RPL8P62917 257 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 POU2AF1Q16633 256 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 LBHQ53QV2 105 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 OR4A47Q6IF82 309 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 CLEC19AQ6UXS0 136 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 SSX9Q7RTT3 188 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 TCTE3Q8IZS6 198 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 SPAG16Q8N0X2 631 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 DEFB125Q8N687 156 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 OR51S1Q8NGJ8 323 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 OR5H2Q8NGV7 314 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 OR4A5Q8NH83 315 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 SECTM1Q8WVN6 248 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 EEF1AKMT3Q96AZ1 226 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 PRRT1Q99946 306 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 RETNQ9HD89 108 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 SCP2D1Q9UJQ7 156 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 ALG5Q9Y673 324 aa6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-221ENST00000520339 TRAV3A0A0B4J244 114 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 PRSS47A8MTI9 375 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 OR11H12B2RN74 326 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 L7N2F9 121 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 UPK2O00526 184 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 PRAF2O60831 178 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 SNAPC5O75971 98 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 S100A8P05109 93 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 CLEC3BP05452 202 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 S100A9P06702 114 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 HIST1H1BP16401 226 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 ARL3P36405 182 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 TAS2R31P59538 309 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 GUCA2BQ16661 112 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 FAM106AQ4KMX7 169 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 SLC25A21Q9BQT8 299 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 SLC5A7Q9GZV3 580 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 MED9Q9NWA0 146 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 S4R3C0 116 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 LYSTQ99698 3801 aa6.95□□□□□ -1.3
CTNNA1-221ENST00000520339 EPPK1P58107 5090 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 TRBV7-1A0A0A6YYK4 115 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 IGLC7A0M8Q6 106 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 C7orf66A4D0T2 115 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 MFSD2BA6NFX1 497 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 A8MWP6 167 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 HPRT1P00492 218 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 PMP2P02689 132 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 REG1AP05451 166 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 DEFA4P12838 97 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 NQO2P16083 231 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 SPCS3P61009 180 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 SCGB2B2Q4G0G5 96 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 TMEM17Q86X19 198 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 ARRDC1Q8N5I2 433 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 UXS1Q8NBZ7 420 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 OR5AP2Q8NGF4 316 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 CACNG8Q8WXS5 425 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 ST6GAL2Q96JF0 529 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 FAM110AQ9BQ89 295 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 SRSF8Q9BRL6 282 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 TCEAL7Q9BRU2 100 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 SRD5A3Q9H8P0 318 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 MLXQ9UH92 298 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 SELENOKQ9Y6D0 94 aa6.94□□□□□ -1.3
CTNNA1-221ENST00000520339 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 ZNF320A2RRD8 509 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 KRBOX1C9JBD0 128 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 TSPAN4O14817 238 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 RLN1P04808 185 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 FABP1P07148 127 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms