RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 C20orf24Q9BUV8 137 aa13.13□□□□□ -0.31
CLK4-204ENST00000520126 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
CLK4-204ENST00000520126 NOTCH1P46531 2555 aa13.12□□□□□ -0.31
CLK4-204ENST00000520126 RPS10-NUDT3A0A1W2PQS6 291 aa13.12□□□□□ -0.31
CLK4-204ENST00000520126 C5orf51A6NDU8 294 aa13.12□□□□□ -0.31
CLK4-204ENST00000520126 PITX3O75364 302 aa13.12□□□□□ -0.31
CLK4-204ENST00000520126 C2orf83Q53S99 150 aa13.12□□□□□ -0.31
CLK4-204ENST00000520126 SPSB3Q6PJ21 355 aa13.12□□□□□ -0.31
CLK4-204ENST00000520126 U3KQ87 197 aa13.12□□□□□ -0.31
CLK4-204ENST00000520126 FAM90A26D6RGX4 464 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 INMT-MINDY4F8WBC2 141 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 ZNF207O43670 478 aaKnown RBP13.11□□□□□ -0.31
CLK4-204ENST00000520126 SYNGR2O43760 224 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 CSN3P07498 182 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 EDN2P20800 178 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 EGFEM1PQ0D2K5 195 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 UNQ9165/PRO28630Q6UXU0 137 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 OR10C1Q96KK4 312 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 TXN2Q99757 166 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 GPN1Q9HCN4 374 aaPredicted RBP13.11□□□□□ -0.31
CLK4-204ENST00000520126 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
CLK4-204ENST00000520126 WI2-2373I1.2A0A1W2PRP0 233 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 F8W735 103 aaPredicted RBP13.1□□□□□ -0.31
CLK4-204ENST00000520126 CTSGP08311 255 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 SPNP16150 400 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 NKX2-1P43699 371 aaPredicted RBP13.1□□□□□ -0.31
CLK4-204ENST00000520126 POLR2GP62487 172 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLK4-204ENST00000520126 RAB11AP62491 216 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 RELQ04864 619 aaPredicted RBP13.1□□□□□ -0.31
CLK4-204ENST00000520126 BSXQ3C1V8 233 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 TM4SF20Q53R12 229 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 IL34Q6ZMJ4 242 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 REC114Q7Z4M0 266 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 CACNG8Q8WXS5 425 aa13.1□□□□□ -0.31
CLK4-204ENST00000520126 FNDC4Q9H6D8 234 aaPredicted RBP13.1□□□□□ -0.31
CLK4-204ENST00000520126 C2orf70A6NJV1 201 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 H3BP45 60 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 LGALS9O00182 355 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 SSSCA1O60232 199 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 FOLR2P14207 255 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 ADMP35318 185 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
CLK4-204ENST00000520126 SPANXN5Q5MJ07 72 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 ETFRF1Q6IPR1 90 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
CLK4-204ENST00000520126 RNASEH2CQ8TDP1 164 aaKnown RBP13.09□□□□□ -0.31
CLK4-204ENST00000520126 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 CIB3Q96Q77 187 aaPredicted RBP13.09□□□□□ -0.31
CLK4-204ENST00000520126 ZNF256Q9Y2P7 627 aaPredicted RBP13.09□□□□□ -0.31
CLK4-204ENST00000520126 UFC1Q9Y3C8 167 aa13.09□□□□□ -0.31
CLK4-204ENST00000520126 SCGB2A1O75556 95 aa13.08□□□□□ -0.32
CLK4-204ENST00000520126 IL5P05113 134 aa13.08□□□□□ -0.32
CLK4-204ENST00000520126 OR4D5Q8NGN0 318 aa13.08□□□□□ -0.32
CLK4-204ENST00000520126 TMEM170AQ8WVE7 144 aa13.08□□□□□ -0.32
CLK4-204ENST00000520126 MRPL36Q9P0J6 103 aaKnown RBP13.08□□□□□ -0.32
CLK4-204ENST00000520126 NDUFA4O00483 81 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 WIPF1O43516 503 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 TMEM50AO95807 157 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 CBLN1P23435 193 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 RND2P52198 227 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 GSG1LQ6UXU4 331 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 ATP6V0BQ99437 205 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 ZNF436Q9C0F3 470 aaPredicted RBP13.07□□□□□ -0.32
CLK4-204ENST00000520126 PSENENQ9NZ42 101 aa13.07□□□□□ -0.32
CLK4-204ENST00000520126 LSM5Q9Y4Y9 91 aaKnown RBP13.07□□□□□ -0.32
CLK4-204ENST00000520126 TMEM213A2RRL7 107 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 K7EIL1 84 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 CLN5O75503 358 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 IGLV1-51P01701 117 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 SLC25A4P12235 298 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 GP9P14770 177 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 ID3Q02535 119 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 GUCA2BQ16661 112 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 TIGITQ495A1 244 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 PRSS54Q6PEW0 395 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 SLC16A13Q7RTY0 426 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 OR4X1Q8NH49 305 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 TMEM190Q8WZ59 177 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 NPIPB3Q92617 1050 aa13.06□□□□□ -0.32
CLK4-204ENST00000520126 STRAPQ9Y3F4 350 aaKnown RBP13.06□□□□□ -0.32
CLK4-204ENST00000520126 MEGF8Q7Z7M0 2845 aa13.05□□□□□ -0.32
CLK4-204ENST00000520126 IGHV3-49A0A0A0MS15 119 aa13.05□□□□□ -0.32
CLK4-204ENST00000520126 C15orf62A8K5M9 175 aa13.05□□□□□ -0.32
CLK4-204ENST00000520126 PRAF2O60831 178 aa13.05□□□□□ -0.32
CLK4-204ENST00000520126 FCGR2BP31994 310 aaPredicted RBP13.05□□□□□ -0.32
CLK4-204ENST00000520126 CD69Q07108 199 aa13.05□□□□□ -0.32
CLK4-204ENST00000520126 DCTN2Q13561 401 aaKnown RBP13.05□□□□□ -0.32
CLK4-204ENST00000520126 CD300EQ496F6 205 aaPredicted RBP13.05□□□□□ -0.32
CLK4-204ENST00000520126 LCN12Q6JVE5 192 aa13.05□□□□□ -0.32
CLK4-204ENST00000520126 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
CLK4-204ENST00000520126 SLC35E1Q96K37 410 aa13.05□□□□□ -0.32
CLK4-204ENST00000520126 RCL1Q9Y2P8 373 aaKnown RBP13.05□□□□□ -0.32
CLK4-204ENST00000520126 PUS1Q9Y606 427 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLK4-204ENST00000520126 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
CLK4-204ENST00000520126 IZUMO1RA6ND01 250 aa13.04□□□□□ -0.32
CLK4-204ENST00000520126 L7N2F9 121 aa13.04□□□□□ -0.32
CLK4-204ENST00000520126 GOSR2O14653 212 aa13.04□□□□□ -0.32
CLK4-204ENST00000520126 SSNA1O43805 119 aa13.04□□□□□ -0.32
CLK4-204ENST00000520126 SIX6O95475 246 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms