RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 GALNT14Q96FL9 552 aa11.15□□□□□ -0.62
FBXO28-204ENST00000519894 OR10C1Q96KK4 312 aa11.15□□□□□ -0.62
FBXO28-204ENST00000519894 SPAG8Q99932 426 aaPredicted RBP11.15□□□□□ -0.62
FBXO28-204ENST00000519894 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.62
FBXO28-204ENST00000519894 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.15□□□□□ -0.62
FBXO28-204ENST00000519894 SMPXQ9UHP9 88 aa11.15□□□□□ -0.62
FBXO28-204ENST00000519894 TMEM56-RWDD3S4R434 201 aa11.15□□□□□ -0.62
FBXO28-204ENST00000519894 IGHV7-4-1A0A0J9YVY3 117 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 YIF1AO95070 293 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 TMEM50AO95807 157 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 SUB1P53999 127 aaKnown RBP eCLIP11.14□□□□□ -0.63
FBXO28-204ENST00000519894 SPCS3P61009 180 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 KLF9Q13886 244 aaPredicted RBP11.14□□□□□ -0.63
FBXO28-204ENST00000519894 MLANAQ16655 118 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 BSXQ3C1V8 233 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 LAMTOR1Q6IAA8 161 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 TRIM63Q969Q1 353 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 SCGB3A2Q96PL1 93 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 FNDC4Q9H6D8 234 aaPredicted RBP11.14□□□□□ -0.63
FBXO28-204ENST00000519894 ENY2Q9NPA8 101 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 MCUBQ9NWR8 336 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 CACNG5Q9UF02 275 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 V9GYH0 126 aa11.14□□□□□ -0.63
FBXO28-204ENST00000519894 CORTO00230 105 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 CHEK1O14757 476 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 NPBWR1P48145 328 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 ZNF79Q15937 498 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 PYDC2Q56P42 97 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 IL22RA2Q969J5 263 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 RNF2Q99496 336 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 FAM110AQ9BQ89 295 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 RHPN1-AS1Q9BWJ2 59 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 MRPL36Q9P0J6 103 aaKnown RBP11.13□□□□□ -0.63
FBXO28-204ENST00000519894 UBQLN2Q9UHD9 624 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 KCNIP3Q9Y2W7 256 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 DNAH7Q8WXX0 4024 aa11.13□□□□□ -0.63
FBXO28-204ENST00000519894 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
FBXO28-204ENST00000519894 TRAV14DV4A0A0A6YYC5 116 aa11.12□□□□□ -0.63
FBXO28-204ENST00000519894 SUPT4H1P63272 117 aaKnown RBP11.12□□□□□ -0.63
FBXO28-204ENST00000519894 TOMM20LQ6UXN7 152 aa11.12□□□□□ -0.63
FBXO28-204ENST00000519894 CCDC190Q86UF4 302 aa11.12□□□□□ -0.63
FBXO28-204ENST00000519894 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
FBXO28-204ENST00000519894 LOC102724200A0A096LPH7 203 aaPredicted RBP11.11□□□□□ -0.63
FBXO28-204ENST00000519894 LYL1P12980 280 aa11.11□□□□□ -0.63
FBXO28-204ENST00000519894 AKR1C4P17516 323 aa11.11□□□□□ -0.63
FBXO28-204ENST00000519894 S100A5P33763 92 aa11.11□□□□□ -0.63
FBXO28-204ENST00000519894 OPRK1P41145 380 aa11.11□□□□□ -0.63
FBXO28-204ENST00000519894 ZNF600Q6ZNG1 722 aa11.11□□□□□ -0.63
FBXO28-204ENST00000519894 TOMM5Q8N4H5 51 aa11.11□□□□□ -0.63
FBXO28-204ENST00000519894 GGTLC1Q9BX51 225 aa11.11□□□□□ -0.63
FBXO28-204ENST00000519894 TENM3Q9P273 2699 aa11.11□□□□□ -0.63
FBXO28-204ENST00000519894 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 A0A1B0GU03 582 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 A6NHS1 94 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 CLN5O75503 358 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 NXPH3O95157 252 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 SULT1A3P0DMM9 295 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 SULT1A4P0DMN0 295 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 FAUP35544 74 aaKnown RBP11.1□□□□□ -0.63
FBXO28-204ENST00000519894 HTR2BP41595 481 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 ODF3L2Q3SX64 289 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 C2orf83Q53S99 150 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 FAM90A2PQ658T7 463 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 ZFAND6Q6FIF0 208 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 LYZL2Q7Z4W2 148 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 OR4X1Q8NH49 305 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 HEYLQ9NQ87 328 aaPredicted RBP11.1□□□□□ -0.63
FBXO28-204ENST00000519894 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
FBXO28-204ENST00000519894 STAB2Q8WWQ8 2551 aa11.1□□□□□ -0.63
FBXO28-204ENST00000519894 A0A0B4J2A0 478 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 OR4C46A6NHA9 309 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 CEBPZOSA8MTT3 80 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 APOHP02749 345 aaPredicted RBP11.09□□□□□ -0.63
FBXO28-204ENST00000519894 AP3S2P59780 193 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 NMSQ5H8A3 153 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 LILRB2Q8N423 598 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 TMEM170AQ8WVE7 144 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 GINS3Q9BRX5 216 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 VSIRQ9H7M9 311 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 SHPKQ9UHJ6 478 aa11.09□□□□□ -0.63
FBXO28-204ENST00000519894 CCR6P51684 374 aa11.08□□□□□ -0.64
FBXO28-204ENST00000519894 LGI3Q8N145 548 aa11.08□□□□□ -0.64
FBXO28-204ENST00000519894 SLC24A4Q8NFF2 622 aa11.08□□□□□ -0.64
FBXO28-204ENST00000519894 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
FBXO28-204ENST00000519894 RYR3Q15413 4870 aa11.08□□□□□ -0.64
FBXO28-204ENST00000519894 IGKV3-7A0A075B6H7 116 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 RPS10-NUDT3A0A1W2PQS6 291 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 IGKV1-17P01599 117 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 ANXA3P12429 323 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 TFPI2P48307 235 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 SMCO1Q147U7 214 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 TIGITQ495A1 244 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 PRSS54Q6PEW0 395 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 TCF24Q7RTU0 167 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
FBXO28-204ENST00000519894 DEDD2Q8WXF8 326 aa11.07□□□□□ -0.64
FBXO28-204ENST00000519894 OVOL2Q9BRP0 275 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms