RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 SSX3Q99909 188 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 SRSF8Q9BRL6 282 aaKnown RBP6.75□□□□□ -1.33
HMGB4-203ENST00000519684 KLF2Q9Y5W3 355 aaPredicted RBP6.75□□□□□ -1.33
HMGB4-203ENST00000519684 MDFIC2A0A1B0GVS7 189 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 A0A1W2PRD5 423 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 A0A1W2PRF3 423 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 A0A1W2PRM7 423 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 C19orf84I3L1E1 186 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 PPP1R2P9O14990 202 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 NBR2O15453 112 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 IGHV2-5P01817 119 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 LGALS4P56470 323 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 SSBP2P81877 361 aaPredicted RBP6.75□□□□□ -1.33
HMGB4-203ENST00000519684 HES1Q14469 280 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 PVRIGQ6DKI7 326 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 KCNIP4Q6PIL6 250 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 LINC01551Q86U37 167 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 SLC25A33Q9BSK2 321 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 DERL1Q9BUN8 251 aa6.75□□□□□ -1.33
HMGB4-203ENST00000519684 F11RQ9Y624 299 aaKnown RBP6.75□□□□□ -1.33
HMGB4-203ENST00000519684 SPTBN4Q9H254 2564 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 TRBV24-1A0A075B6N3 115 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 C5orf52A6NGY3 159 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 OOSP1A8MZH6 123 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 TEX22C9J3V5 150 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 AP4M1O00189 453 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 NDUFS7O75251 213 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 CD99P14209 185 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 SRP14P37108 136 aaKnown RBP6.74□□□□□ -1.33
HMGB4-203ENST00000519684 UBE2L3P68036 154 aaKnown RBP6.74□□□□□ -1.33
HMGB4-203ENST00000519684 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 LHFPL4Q7Z7J7 247 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 OR2T10Q8NGZ9 312 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 TRGV9Q99603 122 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 TNFRSF19Q9NS68 423 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 SPTA1P02549 2419 aa6.74□□□□□ -1.33
HMGB4-203ENST00000519684 IGKV1D-37A0A075B6S9 117 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 ELOA3CA0A087WX78 387 aaPredicted RBP6.73□□□□□ -1.33
HMGB4-203ENST00000519684 UBE2CO00762 179 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 CRYGCP07315 174 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 OR10J4P0C629 311 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 MFAP2P55001 183 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 LCN2P80188 198 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 ZNF90Q03938 601 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 LDLRAD2Q5SZI1 272 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 MINOS1Q5TGZ0 78 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 OR5AU1Q8NGC0 362 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 TMEM37Q8WXS4 190 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 CFHR4Q92496 578 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 MINOS1-NBL1R4GNA1 71 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 MALRD1Q5VYJ5 2156 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 TNCP24821 2201 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 FCN1O00602 326 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 HOXB4P17483 251 aaPredicted RBP6.73□□□□□ -1.33
HMGB4-203ENST00000519684 ZFP36P26651 326 aaKnown RBP6.73□□□□□ -1.33
HMGB4-203ENST00000519684 PAX2Q02962 417 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 FABP9Q0Z7S8 132 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 SSX2Q16385 188 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 NPBQ8NG41 125 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 PERPQ96FX8 193 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 SLC25A2Q9BXI2 301 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 ZNF355PQ9NSJ1 428 aa6.73□□□□□ -1.33
HMGB4-203ENST00000519684 MRPL36Q9P0J6 103 aaKnown RBP6.73□□□□□ -1.33
HMGB4-203ENST00000519684 IGHV2-70DA0A0C4DH43 119 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 A0A1W2PRE2 83 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 PSMB11A5LHX3 300 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 PPP5D1E7EU14 171 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 TOX4O94842 621 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 NDUFA3O95167 84 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 GOSR1O95249 250 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 TRGC2P03986 189 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 PFN1P07737 140 aaKnown RBP6.72□□□□□ -1.33
HMGB4-203ENST00000519684 C19orf35Q6ZS72 473 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 LINC00518Q8N0U6 118 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 TMEM116Q8NCL8 245 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 OR1L6Q8NGR2 347 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 OR1B1Q8NGR6 318 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 SFRP2Q96HF1 295 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 EAF1Q96JC9 268 aaPredicted RBP6.72□□□□□ -1.33
HMGB4-203ENST00000519684 BTF3L4Q96K17 158 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 PAXXQ9BUH6 204 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 AURKAIP1Q9NWT8 199 aaPredicted RBP6.72□□□□□ -1.33
HMGB4-203ENST00000519684 IGHV3-21A0A0B4J1V1 117 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 TRAV5A0A0B4J249 113 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 A0A1W2PPQ1 181 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 C9JCJ5 164 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 ORM2P19652 201 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 HNF1AP20823 631 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 PDLIM4P50479 330 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 FXYD3Q14802 87 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 STXBP6Q8NFX7 210 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 FAM167A-AS1Q96KT0 104 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 WNT10AQ9GZT5 417 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 SIRPDQ9H106 197 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 OR51M1Q9H341 326 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 TBL2Q9Y4P3 447 aaKnown RBP6.72□□□□□ -1.33
HMGB4-203ENST00000519684 LY96Q9Y6Y9 160 aa6.72□□□□□ -1.33
HMGB4-203ENST00000519684 HELTA6NFD8 242 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms