RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TANC2Q9HCD6 1990 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 C20orf202A1L168 122 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 M0R1X1 148 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 NPY1RP25929 384 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 HSPE1P61604 102 aaKnown RBP14.89□□□□□ -0.03
SDC2-202ENST00000518385 TIGITQ495A1 244 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 CT45A1Q5HYN5 189 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 DUX4L9Q6RFH8 374 aaPredicted RBP14.89□□□□□ -0.03
SDC2-202ENST00000518385 MUC15Q8N387 334 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 KLHDC1Q8N7A1 406 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 CT45A3Q8NHU0 189 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 CHRDL1Q9BU40 450 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 COMMD5Q9GZQ3 224 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 TECRQ9NZ01 308 aaKnown RBP14.89□□□□□ -0.03
SDC2-202ENST00000518385 YTHDF2Q9Y5A9 579 aaKnown RBP14.89□□□□□ -0.03
SDC2-202ENST00000518385 V9GYV3 84 aa14.89□□□□□ -0.03
SDC2-202ENST00000518385 KMT2BQ9UMN6 2715 aaPredicted RBP14.88□□□□□ -0.03
SDC2-202ENST00000518385 SNURFLB1AK76 121 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 NUPR1O60356 82 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 GPX1P07203 203 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 GNG4P50150 75 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 PRSS8Q16651 343 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 GCSAMLQ5JQS6 135 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 STPG3Q8N7X2 389 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 SLC24A4Q8NFF2 622 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 TMEM208Q9BTX3 173 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 MRPL27Q9P0M9 148 aaKnown RBP14.88□□□□□ -0.03
SDC2-202ENST00000518385 ZNF257Q9Y2Q1 563 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 RAI1Q7Z5J4 1906 aaPredicted RBP14.88□□□□□ -0.03
SDC2-202ENST00000518385 ZNF462Q96JM2 2506 aa14.88□□□□□ -0.03
SDC2-202ENST00000518385 A0A1W2PRE2 83 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 RRHO14718 337 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 CBLN1P23435 193 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 MRPS11P82912 194 aaKnown RBP14.87□□□□□ -0.03
SDC2-202ENST00000518385 CYB5R2Q6BCY4 276 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 SLC25A48Q6ZT89 311 aaKnown RBP14.87□□□□□ -0.03
SDC2-202ENST00000518385 C8orf31Q8N9H6 132 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 DDB2Q92466 427 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 KCNS1Q96KK3 526 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 MRPL32Q9BYC8 188 aaKnown RBP14.87□□□□□ -0.03
SDC2-202ENST00000518385 TMEM140Q9NV12 185 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 UQCR10Q9UDW1 63 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 PRNDQ9UKY0 176 aa14.87□□□□□ -0.03
SDC2-202ENST00000518385 HELTA6NFD8 242 aa14.86□□□□□ -0.03
SDC2-202ENST00000518385 ZNF253O75346 499 aa14.86□□□□□ -0.03
SDC2-202ENST00000518385 AMY1AP04745 511 aa14.86□□□□□ -0.03
SDC2-202ENST00000518385 LINC00310P59036 64 aa14.86□□□□□ -0.03
SDC2-202ENST00000518385 FAM162BQ5T6X4 162 aa14.86□□□□□ -0.03
SDC2-202ENST00000518385 WIPF2Q8TF74 440 aaPredicted RBP14.86□□□□□ -0.03
SDC2-202ENST00000518385 ZNF714Q96N38 554 aa14.86□□□□□ -0.03
SDC2-202ENST00000518385 RBM14Q96PK6 669 aaKnown RBP14.86□□□□□ -0.03
SDC2-202ENST00000518385 TMEM14BQ9NUH8 114 aa14.86□□□□□ -0.03
SDC2-202ENST00000518385 K7EN84 100 aa14.85□□□□□ -0.03
SDC2-202ENST00000518385 ATG101Q9BSB4 218 aa14.85□□□□□ -0.03
SDC2-202ENST00000518385 IER3P46695 156 aa14.85□□□□□ -0.03
SDC2-202ENST00000518385 SUMO1P63165 101 aaKnown RBP14.85□□□□□ -0.03
SDC2-202ENST00000518385 SRSF1Q07955 248 aaKnown RBP eCLIP14.85□□□□□ -0.03
SDC2-202ENST00000518385 PMCHL1Q16048 86 aa14.85□□□□□ -0.03
SDC2-202ENST00000518385 RPL39P5Q59GN2 51 aa14.85□□□□□ -0.03
SDC2-202ENST00000518385 ABCA4P78363 2273 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 USF3Q68DE3 2245 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 GRIFINA4D1Z8 144 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 SAA2P0DJI9 122 aaPredicted RBP14.84□□□□□ -0.03
SDC2-202ENST00000518385 SPINK9Q5DT21 86 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 TMEM200BQ69YZ2 307 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 FAM71F2Q6NXP2 309 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 LYG1Q8N1E2 194 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 LPAR2Q9HBW0 351 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 AURKAIP1Q9NWT8 199 aaPredicted RBP14.84□□□□□ -0.03
SDC2-202ENST00000518385 ZFP30Q9Y2G7 519 aa14.84□□□□□ -0.03
SDC2-202ENST00000518385 ARFGEF3Q5TH69 2177 aa14.83□□□□□ -0.03
SDC2-202ENST00000518385 SMIM27A0A1W2PRY6 76 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 PGPEP1LA6NFU8 196 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 A6NNC1 897 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 DIRC3C9JPN6 131 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 GOSR1O95249 250 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 G0S2P27469 103 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 CTRLP40313 264 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 COMPP49747 757 aaPredicted RBP14.83□□□□□ -0.04
SDC2-202ENST00000518385 RPS16P62249 146 aaKnown RBP14.83□□□□□ -0.04
SDC2-202ENST00000518385 ARSJQ5FYB0 599 aaPredicted RBP14.83□□□□□ -0.04
SDC2-202ENST00000518385 TMEM136Q6ZRR5 245 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 FAM231DQ6ZW35 169 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 LINC00311Q8N616 119 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 OR5B3Q8NH48 314 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 ZNF596Q8TC21 504 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 TMEM190Q8WZ59 177 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 RAB1BQ9H0U4 201 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 NAT8BQ9UHF3 227 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 PKDREJQ9NTG1 2253 aa14.83□□□□□ -0.04
SDC2-202ENST00000518385 A0A1W2PPR1 153 aa14.82□□□□□ -0.04
SDC2-202ENST00000518385 PRRX1P54821 245 aa14.82□□□□□ -0.04
SDC2-202ENST00000518385 CENPWQ5EE01 88 aa14.82□□□□□ -0.04
SDC2-202ENST00000518385 OR4P4Q8NGL7 312 aa14.82□□□□□ -0.04
SDC2-202ENST00000518385 VN1R17PQ8TDU5 208 aa14.82□□□□□ -0.04
SDC2-202ENST00000518385 C1orf159Q96HA4 380 aa14.82□□□□□ -0.04
SDC2-202ENST00000518385 SPOCK3Q9BQ16 436 aa14.82□□□□□ -0.04
SDC2-202ENST00000518385 RALYQ9UKM9 306 aaKnown RBP14.82□□□□□ -0.04
SDC2-202ENST00000518385 IZUMO1RA6ND01 250 aa14.81□□□□□ -0.04
SDC2-202ENST00000518385 ZNF324O75467 553 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms