RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 MCFD2Q8NI22 146 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 FGF13Q92913 245 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 BORCS7Q96B45 105 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 C12orf43Q96C57 262 aaKnown RBP2.45□□□□□ -2.02
CSMD1-203ENST00000518151 MS4A6EQ96DS6 147 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 TBX5Q99593 518 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 NIPSNAP1Q9BPW8 284 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 OR2D2Q9H210 308 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 C14orf105Q9NVL8 296 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 HHLA2Q9UM44 414 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 SCN1AP35498 2009 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 PCM1Q15154 2024 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 EML5Q05BV3 1969 aa2.45□□□□□ -2.02
CSMD1-203ENST00000518151 DMXL2Q8TDJ6 3036 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 MED13LQ71F56 2210 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 IGHV3OR15-7A0A075B7D8 119 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 A0A0B4J2C4 111 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 C7orf66A4D0T2 115 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 FAM159BA6NKW6 160 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 ZNF729A6NN14 1252 aaPredicted RBP2.44□□□□□ -2.02
CSMD1-203ENST00000518151 KNCNA6PVL3 124 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 C2orf74A8MZ97 194 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 PDE6DO43924 150 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 APOMO95445 188 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 TTRP02766 147 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 HIST1H1TP22492 207 aaPredicted RBP2.44□□□□□ -2.02
CSMD1-203ENST00000518151 CD34P28906 385 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 CRABP2P29373 138 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 RPL5P46777 297 aaKnown RBP2.44□□□□□ -2.02
CSMD1-203ENST00000518151 TAS2R41P59536 307 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 SLC36A1Q7Z2H8 476 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 C20orf196Q8IYI0 205 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 ZNF615Q8N8J6 731 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 OR4X1Q8NH49 305 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 RAB2BQ8WUD1 216 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 RTN4IP1Q8WWV3 396 aaPredicted RBP2.44□□□□□ -2.02
CSMD1-203ENST00000518151 GNPNAT1Q96EK6 184 aaPredicted RBP2.44□□□□□ -2.02
CSMD1-203ENST00000518151 CNBD2Q96M20 576 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 CXCL16Q9H2A7 254 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 MRPL27Q9P0M9 148 aaKnown RBP2.44□□□□□ -2.02
CSMD1-203ENST00000518151 TRAPPC1Q9Y5R8 145 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 DOCK9Q9BZ29 2069 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 LAMA5O15230 3695 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 F8P00451 2351 aa2.44□□□□□ -2.02
CSMD1-203ENST00000518151 ASCC3Q8N3C0 2202 aaKnown RBP2.44□□□□□ -2.02
CSMD1-203ENST00000518151 CACNA1EQ15878 2313 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 NBPF19A0A087WUL8 3843 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 ATG2BQ96BY7 2078 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 COL6A6A6NMZ7 2263 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 ARL5CA6NH57 179 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 PCNX2A6NKB5 2137 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 C15orf65H3BRN8 121 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 FAAHO00519 579 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 COX7A2LO14548 114 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 CCL16O15467 120 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 IGHMP01871 453 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 IGLV7-43P04211 117 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 MUC1P15941 1255 aaPredicted RBP2.43□□□□□ -2.02
CSMD1-203ENST00000518151 CCR2P41597 374 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 SNRPD2P62316 118 aaKnown RBP2.43□□□□□ -2.02
CSMD1-203ENST00000518151 ZNF616Q08AN1 781 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 IL15RAQ13261 267 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 PLPPR5Q32ZL2 321 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 Q6ZS52 159 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 LYPD1Q8N2G4 141 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 TBC1D19Q8N5T2 526 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 PACRGLQ8N7B6 248 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 OR4K13Q8NH42 304 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 HIST1H2BAQ96A08 127 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 TCEAL4Q96EI5 215 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 CCL13Q99616 98 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 C1orf50Q9BV19 199 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 RNASE7Q9H1E1 156 aaKnown RBP2.43□□□□□ -2.02
CSMD1-203ENST00000518151 SLC23A2Q9UGH3 650 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 RPUSD1Q9UJJ7 312 aaKnown RBP2.43□□□□□ -2.02
CSMD1-203ENST00000518151 UTP11Q9Y3A2 253 aaKnown RBP2.43□□□□□ -2.02
CSMD1-203ENST00000518151 NID2Q14112 1375 aa2.43□□□□□ -2.02
CSMD1-203ENST00000518151 PDCD11Q14690 1871 aaKnown RBP2.43□□□□□ -2.02
CSMD1-203ENST00000518151 COL27A1Q8IZC6 1860 aaPredicted RBP2.43□□□□□ -2.02
CSMD1-203ENST00000518151 RTTNQ86VV8 2226 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 MTORP42345 2549 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 LAMA1P25391 3075 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 NOTCH1P46531 2555 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 KIF26AQ9ULI4 1882 aaPredicted RBP2.42□□□□□ -2.02
CSMD1-203ENST00000518151 IGKV1OR2-108A0A075B7D4 117 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 IGHV1-69-2A0A0G2JMI3 117 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 hADV38S2A0JD32 116 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 OR5K4A6NMS3 321 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 H3BMM0 161 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 ATG12O94817 140 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 CRYZL1O95825 349 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 HLA-DRB1P01911 266 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 CD7P09564 240 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 OPRM1P35372 400 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 CRYBA4P53673 196 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 RPS20P60866 119 aaKnown RBP2.42□□□□□ -2.02
CSMD1-203ENST00000518151 GNGT1P63211 74 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 PYCR3Q53H96 274 aa2.42□□□□□ -2.02
CSMD1-203ENST00000518151 LDLRAD2Q5SZI1 272 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms