RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.68□□□□□ -1.66
CD47-205ENST00000517766 ZNF114Q8NC26 417 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 OR1L6Q8NGR2 347 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 OR2T10Q8NGZ9 312 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 IGFBPL1Q8WX77 278 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 C22orf15Q8WYQ4 148 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 RNF2Q99496 336 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 CCL19Q99731 98 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 PIMREGQ9BSJ6 248 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 SIRPDQ9H106 197 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 TUBA4BQ9H853 241 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 SLC25A22Q9H936 323 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 SIRT7Q9NRC8 400 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 METTL1Q9UBP6 276 aaKnown RBP4.68□□□□□ -1.66
CD47-205ENST00000517766 SIGLEC9Q9Y336 463 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 SPTA1P02549 2419 aa4.68□□□□□ -1.66
CD47-205ENST00000517766 CGB1A6NKQ9 187 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 VWC2LB2RUY7 222 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 B4DEV8 164 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 TMEM250H0YL14 139 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 M0R036 132 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 TSPAN4O14817 238 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 TIMM23O14925 209 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 NBR2O15453 112 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 NDUFS7O75251 213 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 YIF1AO95070 293 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 NDUFA3O95167 84 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 VENTXO95231 258 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 CXorf1O96002 111 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 MOSP00540 346 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 IGHV4-39P01824 125 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 FBP1P09467 338 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 STAG3L2P0CL84 134 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 STAG3L3P0CL85 134 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 PAX6P26367 422 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 UBE2E1P51965 193 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 DSCR9P59020 149 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 LMO4P61968 165 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 MEF2BQ02080 365 aaPredicted RBP4.67□□□□□ -1.66
CD47-205ENST00000517766 PNRC1Q12796 327 aaPredicted RBP4.67□□□□□ -1.66
CD47-205ENST00000517766 GAMTQ14353 236 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 PLGLAQ15195 96 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 MRGPRG-AS1Q2M3A8 158 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 FAM74A3Q4VXF1 159 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 AWAT1Q58HT5 328 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 MIC13Q5XKP0 118 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 PVRIGQ6DKI7 326 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 HCP5Q6MZN7 132 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 NPBQ8NG41 125 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 OR10W1Q8NGF6 305 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 MALSU1Q96EH3 234 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 TVP23CQ96ET8 276 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 NIPSNAP3BQ9BS92 247 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 BPESC1Q9GZL8 116 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 LPAR2Q9HBW0 351 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 RPS10P5Q9NQ39 176 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 SMCO4Q9NRQ5 59 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 CACNA1AO00555 2505 aa4.67□□□□□ -1.66
CD47-205ENST00000517766 LAMA5O15230 3695 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 IGLC7A0M8Q6 106 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 A1L4Q6 167 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 C7orf77A4D0Y5 90 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 FAM74A7A6NL05 159 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 E7EUB6 86 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 F6UZH7 168 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 H3BQ15 152 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 CLN5O75503 358 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 PAX1P15863 534 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 CNTFRP26992 372 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 OR10J1P30954 320 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 BRS3P32247 399 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 DLX1P56177 255 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 TAS2R45P59539 299 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 SELENOTP62341 195 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 LCN2P80188 198 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 WT1-ASQ06250 92 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 KLRD1Q13241 179 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 EBI3Q14213 229 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 MMDQ15546 238 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 CLEC2AQ6UVW9 174 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 CYP2G1PQ6ZSU1 146 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 C15orf54Q8N8G6 183 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 CYB561D1Q8N8Q1 229 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 THAP8Q8NA92 274 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 OR1L4Q8NGR5 311 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 OR1P1Q8NH06 330 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 GATAD1Q8WUU5 269 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 SSMEM1Q8WWF3 244 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 SRSF12Q8WXF0 261 aaKnown RBP4.66□□□□□ -1.66
CD47-205ENST00000517766 RITA1Q96K30 269 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 Q96MF0 132 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 PFDN5Q99471 154 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 MLST8Q9BVC4 326 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 MRPL32Q9BYC8 188 aaKnown RBP4.66□□□□□ -1.66
CD47-205ENST00000517766 FBXL15Q9H469 300 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 SEPSECSQ9HD40 501 aaKnown RBP4.66□□□□□ -1.66
CD47-205ENST00000517766 TMEM167BQ9NRX6 74 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
CD47-205ENST00000517766 TECRQ9NZ01 308 aaKnown RBP4.66□□□□□ -1.66
CD47-205ENST00000517766 C1RLQ9NZP8 487 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms