RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 CD109Q6YHK3 1445 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 ADGRL2O95490 1459 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 PZPP20742 1482 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 EFCAB5A4FU69 1503 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 MROH2BQ7Z745 1585 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 DIP2CQ9Y2E4 1556 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 CLTCL1P53675 1640 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 ABCA5Q8WWZ7 1642 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 ARAP2Q8WZ64 1704 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 MUC22E2RYF6 1773 aaPredicted RBP0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 ZGRF1Q86YA3 2104 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 F5P12259 2224 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 TMED7-TICAM2A0A0A6YYA0 188 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 CREBL2O60519 120 aaPredicted RBP0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 RNASE3P12724 160 aaKnown RBP0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 CCL5P13501 91 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 CXCL2P19875 107 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 PVALBP20472 110 aaPredicted RBP0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 SPRR2DP22532 72 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 CFL1P23528 166 aaKnown RBP0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 KCNJ3P48549 501 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 EVX1P49640 407 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 C4orf26Q17RF5 130 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 ACSM3Q53FZ2 586 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 RBM48Q5RL73 367 aaKnown RBP0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 FAM27BQ5VT28 67 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 C12orf43Q96C57 262 aaKnown RBP0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 KIF24Q5T7B8 1368 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 MYOM2P54296 1465 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 MBD5Q9P267 1494 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 DNAH17Q9UFH2 4485 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 TOGARAM1Q9Y4F4 1720 aa0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 CHD3Q12873 2000 aaKnown RBP0.26□□□□□ -2.37
SCARNA1-201ENST00000517138 MGAMO43451 1857 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 NKTRP30414 1462 aaKnown RBP0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 ATP7BP35670 1465 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 NCAPD3P42695 1498 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 NUP160Q12769 1436 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 ARHGAP31Q2M1Z3 1444 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 CXCL3P19876 107 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 SYT1P21579 422 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 ALDH3A1P30838 453 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 PLPPR5Q32ZL2 321 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 DCXRQ7Z4W1 244 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 UMODL1-AS1Q8N2C9 162 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 ZNF439Q8NDP4 499 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 CYTH2Q99418 400 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 MROQ9BYG7 248 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 CHST6Q9GZX3 395 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 PCYT1BQ9Y5K3 369 aaPredicted RBP0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 LHFPL6Q9Y693 200 aa0.25□□□□□ -2.37
SCARNA1-201ENST00000517138 NRAPQ86VF7 1730 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 CTTNBP2Q8WZ74 1663 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 PTPN23Q9H3S7 1636 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 ZNF609O15014 1411 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 TONSLQ96HA7 1378 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 MT-CO2P00403 227 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 HLA-DQB2P05538 268 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 REG1BP48304 166 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 RASSF6Q6ZTQ3 369 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 SPATA24Q86W54 205 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 TMEM86AQ8N2M4 240 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 RIBC1Q8N443 379 aaPredicted RBP0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 ZNF565Q8N9K5 539 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 RAB2BQ8WUD1 216 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 TESCQ96BS2 214 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 SMR3AQ99954 134 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 MED10Q9BTT4 135 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 SNURFQ9Y675 71 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 VPS13BQ7Z7G8 4022 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 KDM3BQ7LBC6 1761 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 IFT172Q9UG01 1749 aa0.24□□□□□ -2.37
SCARNA1-201ENST00000517138 CCDC144AA2RUR9 1427 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 KIF13BQ9NQT8 1826 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 GOLGA8QA0A0J9YX86 632 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 GOLGA8RI6L899 631 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 AZIN1O14977 448 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 AP1S1P61966 158 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 CST9Q5W186 159 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 RPP25LQ8N5L8 163 aaKnown RBP0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 OR10D3Q8NH80 312 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 LRRC45Q96CN5 670 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 TMEM109Q9BVC6 243 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 ZNHIT6Q9NWK9 470 aaKnown RBP0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 DDX60Q8IY21 1712 aaKnown RBP0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 NRXN2Q9P2S2 1712 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 ABCC1P33527 1531 aa0.23□□□□□ -2.37
SCARNA1-201ENST00000517138 SOGA1O94964 1423 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 PRG4Q92954 1404 aaPredicted RBP0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 MON2Q7Z3U7 1717 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 NWD2Q9ULI1 1742 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 CLTCQ00610 1675 aaKnown RBP0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 TMEM269A0A1B0GVZ9 245 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 UBBP0CG47 229 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 MIPP30301 263 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 FKBP1AP62942 108 aaKnown RBP0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 STOML3Q8TAV4 291 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 MROH1Q8NDA8 1641 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 PLXNC1O60486 1568 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 ABCC3O15438 1527 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms