RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 COX7A2LO14548 114 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 SPINK8P0C7L1 97 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 PPIBP23284 216 aaKnown RBP-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 PSMA5P28066 241 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 AP2S1P53680 142 aaPredicted RBP-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 TPRG1LQ5T0D9 272 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 UBE2DNLQ8IWF7 75 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 MICU2Q8IYU8 434 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 OR13D1Q8NGV5 346 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 OR10AG1Q8NH19 301 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 SCGB3A1Q96QR1 104 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 DSCR8Q96T75 97 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 RAB1BQ9H0U4 201 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 LYARQ9NX58 379 aaKnown RBP-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 RSL24D1Q9UHA3 163 aaKnown RBP-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 MRPS7Q9Y2R9 242 aaKnown RBP-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 C5orf42Q9H799 3197 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 VIRMAQ69YN4 1812 aaKnown RBP-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 KIDINS220Q9ULH0 1771 aa-3.86□□□□□ -3.03
RNU6-539P-201ENST00000516665 NPATQ14207 1427 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 PLXNA2O75051 1894 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 A0A0J9YY99 117 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 LOC101927531A0A1B0GV80 90 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 STOMP27105 288 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 DLX6P56179 175 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 PMF1Q6P1K2 205 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 RUFY3Q7L099 469 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 BPIFA4PQ86YQ2 179 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 Q8IYB0 196 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 TRAM1L1Q8N609 369 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 OR2T35Q8NGX2 323 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 ZNF431Q8TF32 576 aaPredicted RBP-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 DMAC2Q9NW81 257 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 TOPBP1Q92547 1522 aa-3.87□□□□□ -3.03
RNU6-539P-201ENST00000516665 TMED7-TICAM2A0A0A6YYA0 188 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 H0YAA0 97 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 ERC2-IT1O76042 136 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 BRMS1LQ5PSV4 323 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 ASCL4Q6XD76 172 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 LINC00299Q6ZSB3 139 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 DEFB132Q7Z7B7 95 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 OR52E4Q8NGH9 312 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 NRGNQ92686 78 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 DTNBP1Q96EV8 351 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 C9orf72Q96LT7 481 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 LINC00472Q9H8W2 130 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 IDI2-AS1Q9NZ38 188 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 IL36BQ9NZH7 164 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 ANAPC10Q9UM13 185 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 TRPM7Q96QT4 1865 aa-3.88□□□□□ -3.03
RNU6-539P-201ENST00000516665 KANK1Q14678 1352 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 TTC41PQ6P2S7 1318 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 C1orf232A0A0U1RR37 186 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 SPINK4O60575 86 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 FAM74A4Q5TZK3 123 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 CLVS1Q8IUQ0 354 aaPredicted RBP-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 SPICQ8N5J4 248 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 BHLHE23Q8NDY6 225 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 OR2AE1Q8NHA4 323 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 CA5BP1Q8WTZ4 195 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 ISOC2Q96AB3 205 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 CCL13Q99616 98 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 C20orf24Q9BUV8 137 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 BEX2Q9BXY8 128 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 FXYD6Q9H0Q3 95 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 ARMC7Q9H6L4 198 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 REV3LO60673 3130 aa-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 SIPA1L3O60292 1781 aaPredicted RBP-3.89□□□□□ -3.03
RNU6-539P-201ENST00000516665 SMG1Q96Q15 3661 aaKnown RBP-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 TRAV8-7A0A075B6U6 113 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 KRT87PA6NCN2 255 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 IFITM5A6NNB3 132 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 FAM25EA8MYX2 175 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 GATCO43716 136 aaKnown RBP-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 CYTH3O43739 400 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 IGHV3-30P01768 117 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 IGHV3-30-5P0DP03 117 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 C4orf22Q6V702 233 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 OR7G1Q8NGA0 311 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 SMIM11BQ8TCY0 68 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 GPR146Q96CH1 333 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 TAS2R13Q9NYV9 303 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 POFUT2Q9Y2G5 429 aa-3.9□□□□□ -3.03
RNU6-539P-201ENST00000516665 TRAV9-1A0A075B6T8 112 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 FXYD6-FXYD2A0A087WZ82 144 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 TRAV8-1A0A0A6YYK1 113 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 ANKRD20A5PA0PJZ0 165 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 B4DSR2 109 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 E7EUB6 86 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 UGT2B10P36537 528 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 ELP6Q0PNE2 266 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 AADACL3Q5VUY0 350 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 LCN8Q6JVE9 175 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 LRRC45Q96CN5 670 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 GNPNAT1Q96EK6 184 aaPredicted RBP-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 COPS4Q9BT78 406 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 GGACTQ9BVM4 153 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 SNX6Q9UNH7 406 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 CASZ1Q86V15 1759 aa-3.91□□□□□ -3.04
RNU6-539P-201ENST00000516665 ACACBO00763 2458 aa-3.92□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms