RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
DDR1-277ENST00000515219 TRAV25A0A0B4J276 109 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 PIGBOS1A0A0B4J2F0 54 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 LINC00854A0A1B0GVQ3 168 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 OR11H12B2RN74 326 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 RBMS2Q15434 407 aaKnown RBP13.06□□□□□ -0.32
DDR1-277ENST00000515219 MLANAQ16655 118 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 BSXQ3C1V8 233 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 ANKRD55Q3KP44 614 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 CENPSQ8N2Z9 138 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 DEFB125Q8N687 156 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 WFDC10AQ9H1F0 79 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 HIPK2Q9H2X6 1198 aa13.06□□□□□ -0.32
DDR1-277ENST00000515219 FNDC4Q9H6D8 234 aaPredicted RBP13.06□□□□□ -0.32
DDR1-277ENST00000515219 NAP1L6A6NFF2 107 aa13.05□□□□□ -0.32
DDR1-277ENST00000515219 TMEM50AO95807 157 aa13.05□□□□□ -0.32
DDR1-277ENST00000515219 C2orf83Q53S99 150 aa13.05□□□□□ -0.32
DDR1-277ENST00000515219 LAMTOR1Q6IAA8 161 aa13.05□□□□□ -0.32
DDR1-277ENST00000515219 SLC24A4Q8NFF2 622 aa13.05□□□□□ -0.32
DDR1-277ENST00000515219 ZNF414Q96IQ9 312 aa13.05□□□□□ -0.32
DDR1-277ENST00000515219 SDHCQ99643 169 aaPredicted RBP13.05□□□□□ -0.32
DDR1-277ENST00000515219 IGHV3-49A0A0A0MS15 119 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 DUXBA0A1W2PPF3 345 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 RPS10-NUDT3A0A1W2PQS6 291 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 SFT2D2O95562 160 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 TNFRSF9Q07011 255 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 PPP1R1AQ13522 171 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 HAGHQ16775 308 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 OR1S1Q8NH92 325 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 OR10C1Q96KK4 312 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 TM2D3Q9BRN9 247 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 SRD5A3Q9H8P0 318 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 MRPL36Q9P0J6 103 aaKnown RBP13.04□□□□□ -0.32
DDR1-277ENST00000515219 SMPXQ9UHP9 88 aa13.04□□□□□ -0.32
DDR1-277ENST00000515219 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 A0A1B0GU03 582 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 CENPXA8MT69 81 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 CLN5O75503 358 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 SCGB2A1O75556 95 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 NPY1RP25929 384 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 TOMM20LQ6UXN7 152 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 ZNF600Q6ZNG1 722 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 TMEM116Q8NCL8 245 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 OR4X1Q8NH49 305 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 DTD1Q8TEA8 209 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 SPAG8Q99932 426 aaPredicted RBP13.03□□□□□ -0.32
DDR1-277ENST00000515219 GINS3Q9BRX5 216 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 RBKSQ9H477 322 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 HSPB7Q9UBY9 170 aa13.03□□□□□ -0.32
DDR1-277ENST00000515219 CHEK1O14757 476 aa13.02□□□□□ -0.33
DDR1-277ENST00000515219 TSPAN4O14817 238 aa13.02□□□□□ -0.33
DDR1-277ENST00000515219 NDUFB6O95139 128 aa13.02□□□□□ -0.33
DDR1-277ENST00000515219 IFNA10P01566 189 aa13.02□□□□□ -0.33
DDR1-277ENST00000515219 IL7P13232 177 aa13.02□□□□□ -0.33
DDR1-277ENST00000515219 NOXA1Q86UR1 476 aa13.02□□□□□ -0.33
DDR1-277ENST00000515219 LRTM2Q8N967 370 aa13.02□□□□□ -0.33
DDR1-277ENST00000515219 RNASEH2CQ8TDP1 164 aaKnown RBP13.02□□□□□ -0.33
DDR1-277ENST00000515219 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.33
DDR1-277ENST00000515219 PUS1Q9Y606 427 aaKnown RBP eCLIP13.02□□□□□ -0.33
DDR1-277ENST00000515219 IGHV3OR16-13A0A075B7E8 117 aa13.01□□□□□ -0.33
DDR1-277ENST00000515219 IGHV3-74A0A0B4J1X5 117 aa13.01□□□□□ -0.33
DDR1-277ENST00000515219 LINC00322Q6ZN03 302 aaPredicted RBP13.01□□□□□ -0.33
DDR1-277ENST00000515219 TMEM170AQ8WVE7 144 aa13.01□□□□□ -0.33
DDR1-277ENST00000515219 RNF2Q99496 336 aa13.01□□□□□ -0.33
DDR1-277ENST00000515219 SPATA25Q9BR10 227 aa13.01□□□□□ -0.33
DDR1-277ENST00000515219 FLVCR2Q9UPI3 526 aa13.01□□□□□ -0.33
DDR1-277ENST00000515219 TMED3Q9Y3Q3 217 aa13.01□□□□□ -0.33
DDR1-277ENST00000515219 U3KQ87 197 aa13.01□□□□□ -0.33
DDR1-277ENST00000515219 TRAV30A0A087WSZ9 112 aa13□□□□□ -0.33
DDR1-277ENST00000515219 RBMY1BA6NDE4 496 aaKnown RBP13□□□□□ -0.33
DDR1-277ENST00000515219 RBMY1EA6NEQ0 496 aaKnown RBP13□□□□□ -0.33
DDR1-277ENST00000515219 HOXB5P09067 269 aa13□□□□□ -0.33
DDR1-277ENST00000515219 RBMY1DP0C7P1 496 aaKnown RBP13□□□□□ -0.33
DDR1-277ENST00000515219 SLC25A4P12235 298 aa13□□□□□ -0.33
DDR1-277ENST00000515219 RND2P52198 227 aa13□□□□□ -0.33
DDR1-277ENST00000515219 UBE2MP61081 183 aaKnown RBP13□□□□□ -0.33
DDR1-277ENST00000515219 ETFRF1Q6IPR1 90 aa13□□□□□ -0.33
DDR1-277ENST00000515219 C7orf50Q9BRJ6 194 aaKnown RBP13□□□□□ -0.33
DDR1-277ENST00000515219 ZFAND3Q9H8U3 227 aa13□□□□□ -0.33
DDR1-277ENST00000515219 PITX3O75364 302 aa12.99□□□□□ -0.33
DDR1-277ENST00000515219 SLC25A6P12236 298 aa12.99□□□□□ -0.33
DDR1-277ENST00000515219 BMI1P35226 326 aa12.99□□□□□ -0.33
DDR1-277ENST00000515219 TIGITQ495A1 244 aa12.99□□□□□ -0.33
DDR1-277ENST00000515219 PRSS54Q6PEW0 395 aa12.99□□□□□ -0.33
DDR1-277ENST00000515219 UBQLN2Q9UHD9 624 aa12.99□□□□□ -0.33
DDR1-277ENST00000515219 HUWE1Q7Z6Z7 4374 aaKnown RBP12.99□□□□□ -0.33
DDR1-277ENST00000515219 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
DDR1-277ENST00000515219 C9orf170A2RU37 121 aa12.98□□□□□ -0.33
DDR1-277ENST00000515219 OR4C46A6NHA9 309 aa12.98□□□□□ -0.33
DDR1-277ENST00000515219 IFNA4P05014 189 aa12.98□□□□□ -0.33
DDR1-277ENST00000515219 BTCP35070 178 aa12.98□□□□□ -0.33
DDR1-277ENST00000515219 OR1S2Q8NGQ3 325 aa12.98□□□□□ -0.33
DDR1-277ENST00000515219 ST8SIA2Q92186 375 aa12.98□□□□□ -0.33
DDR1-277ENST00000515219 IGHV3-66A0A0C4DH42 116 aa12.97□□□□□ -0.33
DDR1-277ENST00000515219 MED6O75586 246 aa12.97□□□□□ -0.33
DDR1-277ENST00000515219 IGKV1-17P01599 117 aa12.97□□□□□ -0.33
DDR1-277ENST00000515219 APOHP02749 345 aaPredicted RBP12.97□□□□□ -0.33
DDR1-277ENST00000515219 OR4E1P0C645 316 aa12.97□□□□□ -0.33
DDR1-277ENST00000515219 IAPPP10997 89 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms