RNA–Protein interactions for RNA: ENST00000515159.5

SLC38A9-222, Transcript of solute carrier family 38 member 9, human

TSL 2

Gene SLC38A9, Length 3,509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-222	ENST00000515159	CCL26	Q9Y258	94 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159		R4GN57	208 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	CHD9	Q3L8U1	2897 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	TMED7-TICAM2	A0A0A6YYA0	188 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	TRAV24	A0A0B4J272	114 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	TRAV34	A0A0B4J273	112 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	SH2D7	A6NKC9	451 aa	Predicted RBP	3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159		K7EQM0	130 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	NXPH3	O95157	252 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	ADH4	P08319	380 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	CDA	P32320	146 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	CENPW	Q5EE01	88 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	DNAJA3	Q96EY1	480 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	DNAJC30	Q96LL9	226 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	CNFN	Q9BYD5	112 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	SLC39A9	Q9NUM3	307 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	SPCS1	Q9Y6A9	102 aa		3.6	□□□□□ -1.83
SLC38A9-222	ENST00000515159	UBE2L5P	A0A1B0GUS4	154 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	MDFIC2	A0A1B0GVS7	189 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	LY6L	H3BQJ8	138 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159		H3BSH0	61 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	COL8A1	P27658	744 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	POU2AF1	Q16633	256 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	ZNF766	Q5HY98	468 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	TEX36	Q5VZQ5	186 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	SSX8	Q7RTT4	187 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	BAGE3	Q86Y29	109 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	TSTD1	Q8NFU3	115 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	NKD1	Q969G9	470 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	SAMD10	Q9BYL1	202 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	PRTFDC1	Q9NRG1	225 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	MED12L	Q86YW9	2145 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	MYO15A	Q9UKN7	3530 aa		3.59	□□□□□ -1.83
SLC38A9-222	ENST00000515159	IGKV1OR2-108	A0A075B7D4	117 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	IGKV2D-26	A0A0A0MRZ7	120 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159		A0A1W2PPV4	95 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159		H3BUT2	72 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	SLC31A1	O15431	190 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	GFRA3	O60609	400 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	CD7	P09564	240 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	PRTN3	P24158	256 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ID1	P41134	155 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	GPR1	P46091	355 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	NDUFV3	P56181	108 aa	Known RBP	3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	PLP1	P60201	277 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	SQSTM1	Q13501	440 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	CLEC12B	Q2HXU8	276 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	H1FNT	Q75WM6	255 aa	Predicted RBP	3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	CEND1	Q8N111	149 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	MDFI	Q99750	246 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	RNASE7	Q9H1E1	156 aa	Known RBP	3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	PPDPF	Q9H3Y8	114 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159	CDH23	Q9H251	3354 aa		3.59	□□□□□ -1.84
SLC38A9-222	ENST00000515159		H0YIG0	161 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	CCDC179	H3BU77	68 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	FOXH1	O75593	365 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	OXT	P01178	125 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	CRYAA	P02489	173 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	HIST1H1E	P10412	219 aa	Known RBP	3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	TLE1	Q04724	770 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	C5orf47	Q569G3	176 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ZNF329	Q86UD4	541 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ZBTB34	Q8NCN2	500 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	NFAM1	Q8NET5	270 aa	Predicted RBP	3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ZNRF2	Q8NHG8	242 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ST6GALNAC6	Q969X2	333 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	SNRNP40	Q96DI7	357 aa	Known RBP	3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	AGPAT4-IT1	Q9H0P7	198 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	NXF5	Q9H1B4	397 aa	Known RBP	3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	CACNG5	Q9UF02	275 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	TCF19	Q9Y242	345 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159		H0YGG7	62 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	SLC25A16	P16260	332 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ZNF90	Q03938	601 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	RRN3P1	Q2M238	152 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	MOB1B	Q7L9L4	216 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	SUMF1	Q8NBK3	374 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	NPIPB3	Q92617	1050 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	IRF7	Q92985	503 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	AMELX	Q99217	191 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	CYSLTR1	Q9Y271	337 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	SPACA6	W5XKT8	324 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159		A0A1W2PR77	199 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	TLX3	O43711	291 aa	Predicted RBP	3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ARL4D	P49703	201 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	RPL30	P62888	115 aa	Known RBP	3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159		Q56UQ5	140 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	AMTN	Q6UX39	209 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	MOB3B	Q86TA1	216 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	OR11H6	Q8NGC7	330 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	FAM103A1	Q9BTL3	118 aa	Known RBP	3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	PRDM14	Q9GZV8	571 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	YAE1D1	Q9NRH1	226 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	HSPB8	Q9UJY1	196 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	SPTB	P11277	2137 aa		3.58	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ZFHX3	Q15911	3703 aa		3.57	□□□□□ -1.84
SLC38A9-222	ENST00000515159	NPIPB5	A8MRT5	1133 aa		3.57	□□□□□ -1.84
SLC38A9-222	ENST00000515159	ANGPTL7	O43827	346 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms