RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 OR10P1Q8NGE3 313 aa9.28□□□□□ -0.92
PDLIM5-220ENST00000514830 OR4X1Q8NH49 305 aa9.28□□□□□ -0.92
PDLIM5-220ENST00000514830 SCARB1Q8WTV0 552 aa9.28□□□□□ -0.92
PDLIM5-220ENST00000514830 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
PDLIM5-220ENST00000514830 DCUN1D4Q92564 292 aa9.28□□□□□ -0.92
PDLIM5-220ENST00000514830 EEF1AKMT3Q96AZ1 226 aa9.28□□□□□ -0.92
PDLIM5-220ENST00000514830 MISP3Q96FF7 219 aa9.28□□□□□ -0.92
PDLIM5-220ENST00000514830 TNFSF18Q9UNG2 199 aa9.28□□□□□ -0.92
PDLIM5-220ENST00000514830 TCRBV4S1A1TA0A5B7 111 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 MFSD2BA6NFX1 497 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 ADARB2-AS1A8MUL3 147 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 I3L521 148 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 LGALS1P09382 135 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 METTL15P1P0C7V9 234 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 RPL12P30050 165 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 S100A11P31949 105 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 OPRK1P41145 380 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 MFAP4P55083 255 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 HBG1P69891 147 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 HBG2P69892 147 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 EWSR1Q01844 656 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 ATP6V1FQ16864 119 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 VWC2Q2TAL6 325 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 SLC16A13Q7RTY0 426 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 ZNF546Q86UE3 836 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 CCDC140Q96MF4 163 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 C21orf62Q9NYP8 219 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 HSPB11Q9Y547 144 aa9.27□□□□□ -0.93
PDLIM5-220ENST00000514830 RNF222A6NCQ9 220 aa9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 F8W735 103 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 NUP62P37198 522 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 NPBWR1P48145 328 aa9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 ARL16Q0P5N6 197 aa9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 ZNF345Q14585 488 aa9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 SPSB3Q6PJ21 355 aa9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 LCNL1Q6ZST4 164 aa9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 ACOT7LQ6ZUV0 252 aa9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 C3orf56Q8N813 242 aa9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 INO80EQ8NBZ0 244 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 BSCL2Q96G97 398 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 CITED2Q99967 270 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-220ENST00000514830 TRAV30A0A087WSZ9 112 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 FXYD6-FXYD2A0A087WZ82 144 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 CLN5O75503 358 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 CST7O76096 145 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 NHLH2Q02577 135 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 SLC38A11Q08AI6 406 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 OR2F1Q13607 317 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 GAMTQ14353 236 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 OR8G2PQ6IF36 304 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 SHISA2Q6UWI4 295 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 THAP8Q8NA92 274 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 OR11H4Q8NGC9 324 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 SLC35E1Q96K37 410 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 HYLS1Q96M11 299 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 PAIP2BQ9ULR5 123 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-220ENST00000514830 SCGB2A1O75556 95 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 HSPB1P04792 205 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 CTSGP08311 255 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 FHL3Q13643 280 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 MLANAQ16655 118 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 ACSM6Q6P461 480 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 TMEM144Q7Z5S9 345 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 OR1S2Q8NGQ3 325 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 OR5C1Q8NGR4 320 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 TMEM147Q9BVK8 224 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 PARD6GQ9BYG4 376 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 NPVFQ9HCQ7 196 aa9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 MRPL36Q9P0J6 103 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 PEF1Q9UBV8 284 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 LSM4Q9Y4Z0 139 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-220ENST00000514830 A0A0D9SG52 128 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 TGOLN2O43493 480 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 WIPF1O43516 503 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 MPDU1O75352 247 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 DFFBO76075 338 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 IGHV3-11P01762 117 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 CLEC3BP05452 202 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 IGLC1P0CG04 106 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 RND2P52198 227 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 YPEL3P61236 119 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 DEFA5Q01523 94 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 CD300CQ08708 224 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 CLEC19AQ6UXS0 136 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 KCNRGQ8N5I3 272 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 TMEM217Q8N7C4 229 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 KLHL30-AS1Q8NEE0 82 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 TRGV9Q99603 122 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 MFFQ9GZY8 342 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 UQCC1Q9NVA1 299 aa9.23□□□□□ -0.93
PDLIM5-220ENST00000514830 BMPR1BO00238 502 aa9.22□□□□□ -0.93
PDLIM5-220ENST00000514830 TAAR5O14804 337 aa9.22□□□□□ -0.93
PDLIM5-220ENST00000514830 ARPC5O15511 151 aa9.22□□□□□ -0.93
PDLIM5-220ENST00000514830 GNG7O60262 68 aa9.22□□□□□ -0.93
PDLIM5-220ENST00000514830 GGCTO75223 188 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms