RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 GOLGA6L19H0YKK7 550 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 BUB1B-PAK6H3BSN5 160 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 TTRP02766 147 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 SPI1P17947 270 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 CDC42P60953 191 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 KHDC3LQ587J8 217 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 Q6ZQT0 140 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 ZNF565Q8N9K5 539 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 ERGIC3Q9Y282 383 aa1.25□□□□□ -2.21
HMGCS1-207ENST00000514610 A0A087WUJ7 227 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 IFNA10P01566 189 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 CTSDP07339 412 aaPredicted RBP1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 HTR1AP08908 422 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 RGS21Q2M5E4 152 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 KRT222Q8N1A0 295 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 DCSTAMPQ9H295 470 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 SLC39A9Q9NUM3 307 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 C14orf105Q9NVL8 296 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 TAF1LQ8IZX4 1826 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 NEO1Q92859 1461 aa1.24□□□□□ -2.21
HMGCS1-207ENST00000514610 CCDC144AA2RUR9 1427 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 RIC1Q4ADV7 1423 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 TECTAO75443 2155 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 TRAV14DV4A0A0A6YYC5 116 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 TRAV1-1A0A0B4J248 108 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 hADV38S2A0JD32 116 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 E2F6O75461 281 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 OR5F1O95221 314 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 DEFA3P59666 94 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 PLCXD2Q0VAA5 305 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 SRSF6Q13247 344 aaKnown RBP1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 CDK10Q15131 360 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 ZNF826PQ6ZT77 177 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 HIST3H2BBQ8N257 126 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 SIGLECL1Q8N7X8 197 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 OR4E2Q8NGC2 313 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 OR52R1Q8NGF1 315 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 OR5A1Q8NGJ0 315 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 SLC50A1Q9BRV3 221 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 UCK1Q9HA47 277 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 PRELID3BQ9Y3B1 194 aa1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 TNRC6AQ8NDV7 1962 aaKnown RBP1.23□□□□□ -2.21
HMGCS1-207ENST00000514610 CACNA1BQ00975 2339 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 FUOMA2VDF0 154 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 OR2J2O76002 312 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 RBP1P09455 135 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 SMIM10L2AP0DMW4 78 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 SMIM10L2BP0DMW5 78 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 DPPA3Q6W0C5 159 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 AQP3Q92482 292 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 BORCS7Q96B45 105 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 SERPINI1Q99574 410 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 TRIM4Q9C037 500 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 CCDC90BQ9GZT6 254 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 GLTPQ9NZD2 209 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 CYSLTR1Q9Y271 337 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 NCOA1Q15788 1441 aa1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 NCOA6Q14686 2063 aaPredicted RBP1.22□□□□□ -2.21
HMGCS1-207ENST00000514610 SCN8AQ9UQD0 1980 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 FADS1O60427 444 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 ASAH2BP0C7U1 165 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 IL9P15248 144 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 EDDM3AQ14507 147 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 C12orf74Q32Q52 190 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 DEFB128Q7Z7B8 93 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 LINC00471Q8N535 108 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 GDPD1Q8N9F7 314 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 OR4D11Q8NGI4 311 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 CT55Q8WUE5 264 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 OR5AC2Q9NZP5 309 aa1.21□□□□□ -2.22
HMGCS1-207ENST00000514610 NUP210LQ5VU65 1888 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 hCG_1818297A0A087WSY0 165 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 A8MT66 165 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 C1orf196B1AJZ1 125 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 SMIM17P0DL12 118 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 S100A4P26447 101 aaKnown RBP1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 RHEBQ15382 184 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 TMEM97Q5BJF2 176 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 OR51A2Q8NGJ7 313 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 ODF3Q96PU9 254 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 RNASE7Q9H1E1 156 aaKnown RBP1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 IDI2-AS1Q9NZ38 188 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 SLC22A13Q9Y226 551 aa1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 PCF11O94913 1555 aaKnown RBP1.2□□□□□ -2.22
HMGCS1-207ENST00000514610 A0A0D9SG52 128 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 PDE6DO43924 150 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 ZNF682O95780 498 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 S100A6P06703 90 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 RNASE10Q5GAN6 216 aaKnown RBP1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 C12orf29Q8N999 325 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 C20orf27Q9GZN8 174 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 TRABDQ9H4I3 376 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 OSTCQ9NRP0 149 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 UQCC1Q9NVA1 299 aa1.19□□□□□ -2.22
HMGCS1-207ENST00000514610 MED1Q15648 1581 aaPredicted RBP1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 COX6A1P12074 109 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 SSR2P43308 183 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 AP3S2P59780 193 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 HIST1H3AP68431 136 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms