RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 CRIP2P52943 208 aaPredicted RBP12.61□□□□□ -0.39
NUP54-214ENST00000514307 MFAP4P55083 255 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 KLK9Q2XQG4 91 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 ASPHD1Q5U4P2 390 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 ACSM6Q6P461 480 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 IL34Q6ZMJ4 242 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 THAP8Q8NA92 274 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 OR10G4Q8NGN3 311 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 OR10G9Q8NGN4 311 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 OR10G7Q8NGN6 311 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 OR4X1Q8NH49 305 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 TXN2Q99757 166 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 FNDC4Q9H6D8 234 aaPredicted RBP12.61□□□□□ -0.39
NUP54-214ENST00000514307 RPRMQ9NS64 109 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 KLK9Q9UKQ9 250 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 PXMP4Q9Y6I8 212 aa12.61□□□□□ -0.39
NUP54-214ENST00000514307 IGLV11-55A0A075B6I3 123 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 A0A1W2PPV4 95 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 RAB19A4D1S5 217 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 AP4M1O00189 453 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 FOSL1P15407 271 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 S100A1P23297 94 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 OR10J1P30954 320 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 RND2P52198 227 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 COMMD7Q86VX2 200 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 VN1R17PQ8TDU5 208 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 SFT2D1Q8WV19 159 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 MBD3L1Q8WWY6 194 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 GGTLC1Q9BX51 225 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 PRSS22Q9GZN4 317 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 ZNF355PQ9NSJ1 428 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 GAR1Q9NY12 217 aaKnown RBP12.6□□□□□ -0.39
NUP54-214ENST00000514307 RFNGQ9Y644 331 aa12.6□□□□□ -0.39
NUP54-214ENST00000514307 TRAV1-1A0A0B4J248 108 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 TCRBV4S1A1TA0A5B7 111 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 ELLP55199 621 aaPredicted RBP12.59□□□□□ -0.39
NUP54-214ENST00000514307 B2MP61769 119 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 NDPQ00604 133 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 ECSCRQ19T08 205 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 CYP2G1PQ6ZSU1 146 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 LURAP1LQ8IV03 231 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 LYPD6BQ8NI32 183 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 CXorf58Q96LI9 332 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 FANCD2OSQ96PS1 177 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 RNF2Q99496 336 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 TRGV9Q99603 122 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 TNFRSF19Q9NS68 423 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 FBXL7Q9UJT9 491 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 ZNF580Q9UK33 172 aa12.59□□□□□ -0.39
NUP54-214ENST00000514307 HOXA3O43365 443 aaPredicted RBP12.58□□□□□ -0.4
NUP54-214ENST00000514307 BRI3O95415 125 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 BLCAPP62952 87 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 PRR20EP86478 221 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 PRR20CP86479 221 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 PRR20DP86480 221 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 PRR20BP86481 221 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 PRR20AP86496 221 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 EIF4E3Q8N5X7 224 aaKnown RBP12.58□□□□□ -0.4
NUP54-214ENST00000514307 SIGLECL1Q8N7X8 197 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 NECAP1Q8NC96 275 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 ZNF48Q96MX3 618 aaPredicted RBP12.58□□□□□ -0.4
NUP54-214ENST00000514307 NPFFR1Q9GZQ6 430 aa12.58□□□□□ -0.4
NUP54-214ENST00000514307 SH2D7A6NKC9 451 aaPredicted RBP12.57□□□□□ -0.4
NUP54-214ENST00000514307 LINC01548A6NM66 108 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 H3BUA1 57 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 K7EIM0 57 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 CLN5O75503 358 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 LINC00869P0C866 280 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 FHITP49789 147 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 RHOBP62745 196 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 KRTAP1-1Q07627 177 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 MIC13Q5XKP0 118 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 UQCC3Q6UW78 93 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 S100A7AQ86SG5 101 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 STPG3Q8N7X2 389 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 BPIFCQ8NFQ6 507 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 OR1L4Q8NGR5 311 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 CITED4Q96RK1 184 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 PBDC1Q9BVG4 233 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 DMRT1Q9Y5R6 373 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 ABCA2Q9BZC7 2435 aa12.57□□□□□ -0.4
NUP54-214ENST00000514307 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
NUP54-214ENST00000514307 IGHV3-48P01763 117 aa12.56□□□□□ -0.4
NUP54-214ENST00000514307 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
NUP54-214ENST00000514307 RPP25LQ8N5L8 163 aaKnown RBP12.56□□□□□ -0.4
NUP54-214ENST00000514307 GATAD1Q8WUU5 269 aa12.56□□□□□ -0.4
NUP54-214ENST00000514307 ATP6V0BQ99437 205 aa12.56□□□□□ -0.4
NUP54-214ENST00000514307 PFDN5Q99471 154 aa12.56□□□□□ -0.4
NUP54-214ENST00000514307 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
NUP54-214ENST00000514307 OTOGQ6ZRI0 2925 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 IGKV1OR2-108A0A075B7D4 117 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 ELOA3CA0A087WX78 387 aaPredicted RBP12.55□□□□□ -0.4
NUP54-214ENST00000514307 TRBV9A0A0B4J1U6 114 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 MFSD2BA6NFX1 497 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 FAM223BA6NKX1 122 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 SEC14L6B5MCN3 397 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 G3V318 75 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 GNG7O60262 68 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms