RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 CACFD1Q9UGQ2 172 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 U3KQK5 164 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 C15orf62A8K5M9 175 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 SCAF4O95104 1147 aaKnown RBP13.33□□□□□ -0.28
DDR1-272ENST00000513243 NDUFB6O95139 128 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 SFT2D2O95562 160 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 TMEM50AO95807 157 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 OPRK1P41145 380 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 NPBWR1P48145 328 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 TNFRSF9Q07011 255 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 LRTM2Q8N967 370 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 TMEM170AQ8WVE7 144 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 HSPB7Q9UBY9 170 aa13.33□□□□□ -0.28
DDR1-272ENST00000513243 TRAV25A0A0B4J276 109 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 PIGBOS1A0A0B4J2F0 54 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 A0A1B0GU03 582 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 DUXBA0A1W2PPF3 345 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 YIF1AO95070 293 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 BTCP35070 178 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 C2orf83Q53S99 150 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 SLC24A4Q8NFF2 622 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 OR10C1Q96KK4 312 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 HIPK2Q9H2X6 1198 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 FLVCR2Q9UPI3 526 aa13.32□□□□□ -0.28
DDR1-272ENST00000513243 RBPMS2Q6ZRY4 209 aaKnown RBP13.31□□□□□ -0.28
DDR1-272ENST00000513243 OR1S1Q8NH92 325 aa13.31□□□□□ -0.28
DDR1-272ENST00000513243 RBKSQ9H477 322 aa13.31□□□□□ -0.28
DDR1-272ENST00000513243 TUBA4BQ9H853 241 aa13.31□□□□□ -0.28
DDR1-272ENST00000513243 SMPXQ9UHP9 88 aa13.31□□□□□ -0.28
DDR1-272ENST00000513243 A6NHS1 94 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 CENPXA8MT69 81 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 PITX3O75364 302 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 CLN5O75503 358 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 UBE2MP61081 183 aaKnown RBP13.3□□□□□ -0.28
DDR1-272ENST00000513243 TOMM20LQ6UXN7 152 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 DEFB125Q8N687 156 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 OR4X1Q8NH49 305 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 RNASEH2CQ8TDP1 164 aaKnown RBP13.3□□□□□ -0.28
DDR1-272ENST00000513243 DTD1Q8TEA8 209 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 C7orf50Q9BRJ6 194 aaKnown RBP13.3□□□□□ -0.28
DDR1-272ENST00000513243 WFDC10AQ9H1F0 79 aa13.3□□□□□ -0.28
DDR1-272ENST00000513243 IGHV7-4-1A0A0J9YVY3 117 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 RPS10-NUDT3A0A1W2PQS6 291 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 C9orf170A2RU37 121 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 PLA2G10O15496 165 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 NPY1RP25929 384 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 ZNF600Q6ZNG1 722 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 TMED3Q9Y3Q3 217 aa13.29□□□□□ -0.28
DDR1-272ENST00000513243 IGHV3-49A0A0A0MS15 119 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 TRAV14DV4A0A0A6YYC5 116 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 TSPAN4O14817 238 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 IFNA10P01566 189 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 HOXB5P09067 269 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 SLC25A6P12236 298 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 HAGHQ16775 308 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 CNPY1Q3B7I2 92 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 PRSS54Q6PEW0 395 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 LINC00322Q6ZN03 302 aaPredicted RBP13.28□□□□□ -0.28
DDR1-272ENST00000513243 SLC16A13Q7RTY0 426 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 TMEM116Q8NCL8 245 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 WWC2-AS2Q96NR7 200 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 RHPN1-AS1Q9BWJ2 59 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 ZFAND3Q9H8U3 227 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 PUS1Q9Y606 427 aaKnown RBP eCLIP13.28□□□□□ -0.28
DDR1-272ENST00000513243 U3KQ87 197 aa13.28□□□□□ -0.28
DDR1-272ENST00000513243 CHEK1O14757 476 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 IGKV1-17P01599 117 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 ANXA7P20073 488 aaKnown RBP13.27□□□□□ -0.29
DDR1-272ENST00000513243 DHRS2Q13268 280 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 GGNBP1Q5YKI7 109 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 LAMTOR1Q6IAA8 161 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 LINC00299Q6ZSB3 139 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 RCHY1Q96PM5 261 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 RNF2Q99496 336 aa13.27□□□□□ -0.29
DDR1-272ENST00000513243 SPAG8Q99932 426 aaPredicted RBP13.27□□□□□ -0.29
DDR1-272ENST00000513243 IGHV3OR16-13A0A075B7E8 117 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 IGHV3-74A0A0B4J1X5 117 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 RBMY1BA6NDE4 496 aaKnown RBP13.26□□□□□ -0.29
DDR1-272ENST00000513243 RBMY1EA6NEQ0 496 aaKnown RBP13.26□□□□□ -0.29
DDR1-272ENST00000513243 OR4E1P0C645 316 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 RBMY1DP0C7P1 496 aaKnown RBP13.26□□□□□ -0.29
DDR1-272ENST00000513243 SLC25A4P12235 298 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 RND2P52198 227 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 TIGITQ495A1 244 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 LYG2Q86SG7 212 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 GINS3Q9BRX5 216 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 ZMAT4Q9H898 229 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 SRD5A3Q9H8P0 318 aa13.26□□□□□ -0.29
DDR1-272ENST00000513243 TRAV30A0A087WSZ9 112 aa13.25□□□□□ -0.29
DDR1-272ENST00000513243 FAM90A26D6RGX4 464 aa13.25□□□□□ -0.29
DDR1-272ENST00000513243 LYRM1O43325 122 aa13.25□□□□□ -0.29
DDR1-272ENST00000513243 ADAP1O75689 374 aa13.25□□□□□ -0.29
DDR1-272ENST00000513243 APOHP02749 345 aaPredicted RBP13.25□□□□□ -0.29
DDR1-272ENST00000513243 IGLC1P0CG04 106 aa13.25□□□□□ -0.29
DDR1-272ENST00000513243 ETFRF1Q6IPR1 90 aa13.25□□□□□ -0.29
DDR1-272ENST00000513243 CCDC32Q9BV29 185 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms