RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	RAET1L	Q5VY80	246 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	RNASEK	Q6P5S7	137 aa	Known RBP	2.76	□□□□□ -1.97
CAST-238	ENST00000512620		Q6ZS49	121 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	KRTAP7-1	Q8IUC3	87 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	C20orf196	Q8IYI0	205 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	ZNF738	Q8NE65	137 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	OR4B1	Q8NGF8	309 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	MRPL30	Q8TCC3	161 aa	Known RBP	2.76	□□□□□ -1.97
CAST-238	ENST00000512620	SLC37A2	Q8TED4	501 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	PATE1	Q8WXA2	126 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	TIMD4	Q96H15	378 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	CIB3	Q96Q77	187 aa	Predicted RBP	2.76	□□□□□ -1.97
CAST-238	ENST00000512620	HSPB9	Q9BQS6	159 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	RSG1	Q9BU20	258 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	WDR61	Q9GZS3	305 aa	Known RBP	2.76	□□□□□ -1.97
CAST-238	ENST00000512620	UBE2Z	Q9H832	354 aa	Predicted RBP	2.76	□□□□□ -1.97
CAST-238	ENST00000512620	ZNF160	Q9HCG1	818 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	SLC39A9	Q9NUM3	307 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	MRPL27	Q9P0M9	148 aa	Known RBP	2.76	□□□□□ -1.97
CAST-238	ENST00000512620	UQCR10	Q9UDW1	63 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	EML6	Q6ZMW3	1958 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	PCDH15	Q96QU1	1955 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	CEP192	Q8TEP8	1941 aa		2.76	□□□□□ -1.97
CAST-238	ENST00000512620	IGHV3OR16-10	A0A075B7F0	116 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	IGHV2OR16-5	A0A0B4J2B6	119 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	IGKV1-12	A0A0C4DH73	117 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	CTXND1	A0A1B0GTU2	59 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620		A0A1B0GUS0	222 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620		A0A1B0GV72	72 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	LOC102725191	A0A1B0GVB3	256 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	SLC22A20	A6NK97	555 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	VSTM2B	A6NLU5	285 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620		F5H5K5	113 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	TRAF3IP2	O43734	574 aa	Predicted RBP	2.75	□□□□□ -1.97
CAST-238	ENST00000512620	SYNGR2	O43760	224 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	ANGPTL7	O43827	346 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	TRAPPC6A	O75865	159 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	SERF1A	O75920	110 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	VAMP5	O95183	116 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	NRAS	P01111	189 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	KRAS	P01116	189 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	TNF	P01375	233 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	IGKV1D-12	P01611	117 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	ZNF883	P0CG24	379 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	CRISP2	P16562	243 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	CCNO	P22674	350 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	CTRL	P40313	264 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	LHX2	P50458	406 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	HNRNPA3	P51991	378 aa	Known RBP	2.75	□□□□□ -1.97
CAST-238	ENST00000512620		Q0VG73	95 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	RUNX3	Q13761	415 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	MMD	Q15546	238 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	HIST3H3	Q16695	136 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	C5orf64	Q2M2E5	130 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	RSPO1	Q2MKA7	263 aa	Predicted RBP	2.75	□□□□□ -1.97
CAST-238	ENST00000512620	PLPPR5	Q32ZL2	321 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	SMIM21	Q3B7S5	101 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	PIGY	Q3MUY2	71 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	FAM120AOS	Q5T036	256 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	ZNF818P	Q6ZRF7	136 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	C1orf174	Q8IYL3	243 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	GAPT	Q8N292	157 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	OSR2	Q8N2R0	312 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	RPP25L	Q8N5L8	163 aa	Known RBP	2.75	□□□□□ -1.97
CAST-238	ENST00000512620	ZNF709	Q8N972	641 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620		Q8N976	141 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	CSNK1G2-AS1	Q8NCQ2	148 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	VN1R17P	Q8TDU5	208 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	ABHD3	Q8WU67	409 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	NAT6	Q93015	286 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	LSM10	Q969L4	123 aa	Known RBP	2.75	□□□□□ -1.97
CAST-238	ENST00000512620	GPR146	Q96CH1	333 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	OXGR1	Q96P68	337 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	OR4C12	Q96R67	309 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	CST9L	Q9H4G1	147 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	ZDHHC11	Q9H8X9	412 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	CCL28	Q9NRJ3	127 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	SLC7A10	Q9NS82	523 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	BET1L	Q9NYM9	111 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	PSENEN	Q9NZ42	101 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	TP53TG3	Q9ULZ0	132 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	ST3GAL6	Q9Y274	331 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	LAMTOR2	Q9Y2Q5	125 aa		2.75	□□□□□ -1.97
CAST-238	ENST00000512620	MRPS16	Q9Y3D3	137 aa	Known RBP	2.75	□□□□□ -1.97
CAST-238	ENST00000512620	TNRC6A	Q8NDV7	1962 aa	Known RBP	2.74	□□□□□ -1.97
CAST-238	ENST00000512620	NCKAP5	O14513	1909 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	IGKV1-27	A0A075B6S5	117 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	IGKV1D-13	A0A0B4J2D9	117 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620		A0A0G2JRQ6	117 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620		A0A0J9YWU9	116 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	UBE2L5P	A0A1B0GUS4	154 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	MDFIC2	A0A1B0GVS7	189 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	GRIFIN	A4D1Z8	144 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	CD300LB	A8K4G0	201 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	FAM166B	A8MTA8	275 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	EPM2A	B3EWF7	344 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	SHISA9	B4DS77	424 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620		H3BP45	60 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620		M0R135	149 aa		2.74	□□□□□ -1.97
CAST-238	ENST00000512620	DEGS1	O15121	323 aa		2.74	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 118 ms